Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.77□□□□□ -0.53
RNF213Q63HN8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RNF213Q63HN8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RNF213Q63HN8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RNF213Q63HN8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RNF213Q63HN8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF213Q63HN8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 MIR4785-201ENST00000585005 73 ntBASIC11.76□□□□□ -0.53
RNF213Q63HN8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF213Q63HN8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RNF213Q63HN8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 OR2A1-AS1-201ENST00000462305 773 ntBASIC11.76□□□□□ -0.53
RNF213Q63HN8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 AP001160.3-201ENST00000601484 763 ntBASIC11.76□□□□□ -0.53
RNF213Q63HN8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF213Q63HN8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RNF213Q63HN8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RNF213Q63HN8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF213Q63HN8 EEF1DP3-203ENST00000566025 782 ntBASIC11.76□□□□□ -0.53
RNF213Q63HN8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC11.76□□□□□ -0.53
RNF213Q63HN8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RNF213Q63HN8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RNF213Q63HN8 CRYGFP-201ENST00000418459 633 ntBASIC11.75□□□□□ -0.53
RNF213Q63HN8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RNF213Q63HN8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RNF213Q63HN8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RNF213Q63HN8 DUSP5P1-201ENST00000441325 1139 ntBASIC11.75□□□□□ -0.53
RNF213Q63HN8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RNF213Q63HN8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RNF213Q63HN8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RNF213Q63HN8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RNF213Q63HN8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 UPK3BP1-201ENST00000428678 509 ntBASIC11.75□□□□□ -0.53
RNF213Q63HN8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RNF213Q63HN8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RNF213Q63HN8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC11.75□□□□□ -0.53
RNF213Q63HN8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC11.74□□□□□ -0.53
RNF213Q63HN8 TERF1P5-201ENST00000477545 1207 ntBASIC11.74□□□□□ -0.53
RNF213Q63HN8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC11.74□□□□□ -0.53
RNF213Q63HN8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
RNF213Q63HN8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF213Q63HN8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC11.74□□□□□ -0.53
RNF213Q63HN8 AP000347.1-202ENST00000435868 847 ntBASIC11.74□□□□□ -0.53
RNF213Q63HN8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC11.74□□□□□ -0.53
RNF213Q63HN8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF213Q63HN8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RNF213Q63HN8 AL512625.2-201ENST00000417533 625 ntBASIC11.74□□□□□ -0.53
RNF213Q63HN8 AL355075.4-201ENST00000554988 638 ntBASIC11.74□□□□□ -0.53
RNF213Q63HN8 RN7SL471P-201ENST00000580476 299 ntBASIC11.74□□□□□ -0.53
RNF213Q63HN8 AC145285.6-201ENST00000604632 637 ntBASIC11.74□□□□□ -0.53
RNF213Q63HN8 AC013268.1-206ENST00000638368 961 ntBASIC11.74□□□□□ -0.53
RNF213Q63HN8 AC112229.1-201ENST00000639295 961 ntBASIC11.74□□□□□ -0.53
RNF213Q63HN8 MYCNOS-205ENST00000641950 531 ntBASIC11.74□□□□□ -0.53
RNF213Q63HN8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RNF213Q63HN8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC11.73□□□□□ -0.53
RNF213Q63HN8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC11.73□□□□□ -0.53
RNF213Q63HN8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
RNF213Q63HN8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF213Q63HN8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.73□□□□□ -0.53
RNF213Q63HN8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF213Q63HN8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC11.73□□□□□ -0.53
RNF213Q63HN8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
RNF213Q63HN8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC11.73□□□□□ -0.53
RNF213Q63HN8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF213Q63HN8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
RNF213Q63HN8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RNF213Q63HN8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF213Q63HN8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF213Q63HN8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF213Q63HN8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.73□□□□□ -0.53
RNF213Q63HN8 HES2-205ENST00000487437 968 ntTSL 3 BASIC11.73□□□□□ -0.53
RNF213Q63HN8 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.73□□□□□ -0.53
RNF213Q63HN8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RNF213Q63HN8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC11.73□□□□□ -0.53
RNF213Q63HN8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RNF213Q63HN8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC11.73□□□□□ -0.53
RNF213Q63HN8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms