Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
TTC39AQ5SRH9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.36■■□□□ 1.81
TTC39AQ5SRH9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TTC39AQ5SRH9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TTC39AQ5SRH9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC26.35■■□□□ 1.81
TTC39AQ5SRH9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.35■■□□□ 1.81
TTC39AQ5SRH9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TTC39AQ5SRH9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
TTC39AQ5SRH9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.35■■□□□ 1.81
TTC39AQ5SRH9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.35■■□□□ 1.81
TTC39AQ5SRH9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.35■■□□□ 1.81
TTC39AQ5SRH9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TTC39AQ5SRH9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.35■■□□□ 1.81
TTC39AQ5SRH9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TTC39AQ5SRH9 AC139530.1-201ENST00000575312 1977 ntBASIC26.35■■□□□ 1.81
TTC39AQ5SRH9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
TTC39AQ5SRH9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
TTC39AQ5SRH9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC39AQ5SRH9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC39AQ5SRH9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.34■■□□□ 1.81
TTC39AQ5SRH9 KRT18P5-201ENST00000436075 1291 ntBASIC26.34■■□□□ 1.81
TTC39AQ5SRH9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.34■■□□□ 1.81
TTC39AQ5SRH9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.34■■□□□ 1.81
TTC39AQ5SRH9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.34■■□□□ 1.81
TTC39AQ5SRH9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.34■■□□□ 1.81
TTC39AQ5SRH9 AP004607.7-201ENST00000527152 1677 ntBASIC26.34■■□□□ 1.81
TTC39AQ5SRH9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC39AQ5SRH9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
TTC39AQ5SRH9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TTC39AQ5SRH9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TTC39AQ5SRH9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
TTC39AQ5SRH9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TTC39AQ5SRH9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
TTC39AQ5SRH9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TTC39AQ5SRH9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TTC39AQ5SRH9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.33■■□□□ 1.81
TTC39AQ5SRH9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.33■■□□□ 1.81
TTC39AQ5SRH9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.33■■□□□ 1.81
TTC39AQ5SRH9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39AQ5SRH9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
TTC39AQ5SRH9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.32■■□□□ 1.8
TTC39AQ5SRH9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39AQ5SRH9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39AQ5SRH9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC26.32■■□□□ 1.8
TTC39AQ5SRH9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39AQ5SRH9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39AQ5SRH9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.32■■□□□ 1.8
TTC39AQ5SRH9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
TTC39AQ5SRH9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39AQ5SRH9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
TTC39AQ5SRH9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 AC009237.3-201ENST00000393279 1427 ntBASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 AC104564.3-201ENST00000582367 638 ntBASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 AC005224.4-201ENST00000583262 1652 ntBASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC39AQ5SRH9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39AQ5SRH9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 NTF6G-201ENST00000591094 616 ntBASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39AQ5SRH9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TTC39AQ5SRH9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.28■■□□□ 1.8
TTC39AQ5SRH9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms