Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRK2Q5S007 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRK2Q5S007 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRK2Q5S007 AL512625.2-201ENST00000417533 625 ntBASIC19.07■□□□□ 0.64
LRRK2Q5S007 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.07■□□□□ 0.64
LRRK2Q5S007 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.07■□□□□ 0.64
LRRK2Q5S007 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LRRK2Q5S007 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRK2Q5S007 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
LRRK2Q5S007 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRK2Q5S007 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRK2Q5S007 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
LRRK2Q5S007 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRK2Q5S007 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRK2Q5S007 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.06■□□□□ 0.64
LRRK2Q5S007 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRK2Q5S007 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRK2Q5S007 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LRRK2Q5S007 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRK2Q5S007 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRK2Q5S007 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
LRRK2Q5S007 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRRK2Q5S007 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRK2Q5S007 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LRRK2Q5S007 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LRRK2Q5S007 AC012618.2-201ENST00000428058 849 ntBASIC19.05■□□□□ 0.64
LRRK2Q5S007 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRK2Q5S007 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.05■□□□□ 0.64
LRRK2Q5S007 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRK2Q5S007 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRK2Q5S007 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRK2Q5S007 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LRRK2Q5S007 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRK2Q5S007 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRK2Q5S007 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRK2Q5S007 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.05■□□□□ 0.64
LRRK2Q5S007 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRK2Q5S007 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRK2Q5S007 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LRRK2Q5S007 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRK2Q5S007 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRK2Q5S007 SNORA78-201ENST00000459373 127 ntBASIC19.04■□□□□ 0.64
LRRK2Q5S007 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRK2Q5S007 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRK2Q5S007 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRK2Q5S007 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRK2Q5S007 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRK2Q5S007 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LRRK2Q5S007 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.04■□□□□ 0.64
LRRK2Q5S007 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.04■□□□□ 0.64
LRRK2Q5S007 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRK2Q5S007 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRK2Q5S007 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRK2Q5S007 AC055733.4-201ENST00000638462 1354 ntBASIC19.03■□□□□ 0.64
LRRK2Q5S007 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRK2Q5S007 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRK2Q5S007 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRK2Q5S007 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRK2Q5S007 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRK2Q5S007 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.03■□□□□ 0.64
LRRK2Q5S007 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRK2Q5S007 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.03■□□□□ 0.64
LRRK2Q5S007 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.03■□□□□ 0.64
LRRK2Q5S007 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRK2Q5S007 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRK2Q5S007 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRK2Q5S007 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRK2Q5S007 AC097658.1-201ENST00000475555 843 ntBASIC19.02■□□□□ 0.64
LRRK2Q5S007 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.02■□□□□ 0.64
LRRK2Q5S007 AC097493.4-201ENST00000641197 219 ntBASIC19.02■□□□□ 0.64
LRRK2Q5S007 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRRK2Q5S007 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRK2Q5S007 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.02■□□□□ 0.63
LRRK2Q5S007 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LRRK2Q5S007 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
LRRK2Q5S007 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.02■□□□□ 0.63
LRRK2Q5S007 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.02■□□□□ 0.63
LRRK2Q5S007 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRRK2Q5S007 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LRRK2Q5S007 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRK2Q5S007 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRK2Q5S007 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRK2Q5S007 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRRK2Q5S007 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRK2Q5S007 AC093787.1-201ENST00000450396 207 ntBASIC19.01■□□□□ 0.63
LRRK2Q5S007 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.01■□□□□ 0.63
LRRK2Q5S007 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRK2Q5S007 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRK2Q5S007 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRK2Q5S007 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRK2Q5S007 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.01■□□□□ 0.63
LRRK2Q5S007 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LRRK2Q5S007 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRK2Q5S007 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19■□□□□ 0.63
LRRK2Q5S007 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRK2Q5S007 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19■□□□□ 0.63
LRRK2Q5S007 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19■□□□□ 0.63
LRRK2Q5S007 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRK2Q5S007 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRK2Q5S007 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms