Protein–RNA interactions for Protein: Q5RKV6

EXOSC6, Exosome complex component MTR3, humanhuman

Known RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC6Q5RKV6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 AL031432.3-201ENST00000607698 485 ntBASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 OR7E47P-201ENST00000546390 1422 ntBASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.07■□□□□ 0.8
EXOSC6Q5RKV6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EXOSC6Q5RKV6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.06■□□□□ 0.8
EXOSC6Q5RKV6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EXOSC6Q5RKV6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXOSC6Q5RKV6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EXOSC6Q5RKV6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXOSC6Q5RKV6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.06■□□□□ 0.8
EXOSC6Q5RKV6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXOSC6Q5RKV6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 EDA-201ENST00000338901 1233 ntBASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 PBX2P1-201ENST00000493219 1291 ntBASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 FAM99A-202ENST00000538190 1989 ntBASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXOSC6Q5RKV6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
EXOSC6Q5RKV6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXOSC6Q5RKV6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXOSC6Q5RKV6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXOSC6Q5RKV6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXOSC6Q5RKV6 AP001330.3-201ENST00000520123 633 ntBASIC20.03■□□□□ 0.8
EXOSC6Q5RKV6 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.03■□□□□ 0.8
EXOSC6Q5RKV6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EXOSC6Q5RKV6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.03■□□□□ 0.8
EXOSC6Q5RKV6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXOSC6Q5RKV6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
EXOSC6Q5RKV6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
EXOSC6Q5RKV6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EXOSC6Q5RKV6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EXOSC6Q5RKV6 AC010542.4-201ENST00000563151 1910 ntBASIC20.02■□□□□ 0.79
EXOSC6Q5RKV6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
EXOSC6Q5RKV6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EXOSC6Q5RKV6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.01■□□□□ 0.79
EXOSC6Q5RKV6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EXOSC6Q5RKV6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
EXOSC6Q5RKV6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EXOSC6Q5RKV6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.01■□□□□ 0.79
EXOSC6Q5RKV6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EXOSC6Q5RKV6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
EXOSC6Q5RKV6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.01■□□□□ 0.79
EXOSC6Q5RKV6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
EXOSC6Q5RKV6 MIR939-201ENST00000401314 82 ntBASIC20.01■□□□□ 0.79
EXOSC6Q5RKV6 IGHV3-19-201ENST00000521488 291 ntBASIC20.01■□□□□ 0.79
EXOSC6Q5RKV6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.01■□□□□ 0.79
EXOSC6Q5RKV6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.01■□□□□ 0.79
EXOSC6Q5RKV6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms