Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.76■□□□□ 0.27
TM4SF20Q53R12 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF20Q53R12 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TM4SF20Q53R12 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF20Q53R12 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF20Q53R12 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF20Q53R12 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 AC233723.2-201ENST00000623798 2106 ntBASIC16.75■□□□□ 0.27
TM4SF20Q53R12 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 OR2I1P-207ENST00000453522 948 ntBASIC16.75■□□□□ 0.27
TM4SF20Q53R12 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF20Q53R12 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.74■□□□□ 0.27
TM4SF20Q53R12 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF20Q53R12 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.74■□□□□ 0.27
TM4SF20Q53R12 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF20Q53R12 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TM4SF20Q53R12 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF20Q53R12 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF20Q53R12 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF20Q53R12 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TM4SF20Q53R12 SLC47A1P1-202ENST00000449666 945 ntBASIC16.74■□□□□ 0.27
TM4SF20Q53R12 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.74■□□□□ 0.27
TM4SF20Q53R12 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF20Q53R12 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF20Q53R12 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TM4SF20Q53R12 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 AC087742.1-201ENST00000575880 1738 ntBASIC16.73■□□□□ 0.27
TM4SF20Q53R12 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.73■□□□□ 0.27
TM4SF20Q53R12 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF20Q53R12 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF20Q53R12 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF20Q53R12 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.72■□□□□ 0.27
TM4SF20Q53R12 AC008764.7-201ENST00000593779 1081 ntBASIC16.72■□□□□ 0.27
TM4SF20Q53R12 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.72■□□□□ 0.27
TM4SF20Q53R12 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF20Q53R12 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF20Q53R12 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF20Q53R12 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF20Q53R12 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.72■□□□□ 0.27
TM4SF20Q53R12 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF20Q53R12 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 ESRRAP2-201ENST00000418437 1549 ntBASIC16.71■□□□□ 0.27
TM4SF20Q53R12 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM4SF20Q53R12 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TM4SF20Q53R12 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TM4SF20Q53R12 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms