Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM35AQ53FP2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM35AQ53FP2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM35AQ53FP2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM35AQ53FP2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 AC142381.2-201ENST00000566120 298 ntBASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 AL034346.1-201ENST00000568244 1277 ntBASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 AC005837.3-201ENST00000612163 286 ntBASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35AQ53FP2 TSPY26P-201ENST00000476365 1326 ntBASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TMEM35AQ53FP2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35AQ53FP2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
TMEM35AQ53FP2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35AQ53FP2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35AQ53FP2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.55■□□□□ 0.88
TMEM35AQ53FP2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35AQ53FP2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35AQ53FP2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35AQ53FP2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 MIR638-201ENST00000385237 100 ntBASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 SMUG1P1-201ENST00000590640 811 ntBASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM35AQ53FP2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.52■□□□□ 0.88
TMEM35AQ53FP2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.52■□□□□ 0.87
TMEM35AQ53FP2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
TMEM35AQ53FP2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.52■□□□□ 0.87
TMEM35AQ53FP2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEM35AQ53FP2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM35AQ53FP2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM35AQ53FP2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEM35AQ53FP2 MIR572-201ENST00000384983 95 ntBASIC20.51■□□□□ 0.87
TMEM35AQ53FP2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.51■□□□□ 0.87
TMEM35AQ53FP2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms