Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.26□□□□□ -0.13
SYCNQ0VAF6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.25□□□□□ -0.13
SYCNQ0VAF6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 AL138724.1-201ENST00000606771 1088 ntBASIC14.25□□□□□ -0.13
SYCNQ0VAF6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.25□□□□□ -0.13
SYCNQ0VAF6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 OR2I1P-207ENST00000453522 948 ntBASIC14.24□□□□□ -0.13
SYCNQ0VAF6 AL031602.1-201ENST00000633169 911 ntBASIC14.24□□□□□ -0.13
SYCNQ0VAF6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SYCNQ0VAF6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 AC131281.2-201ENST00000520478 145 ntBASIC14.23□□□□□ -0.13
SYCNQ0VAF6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 MIR4466-201ENST00000606121 54 ntBASIC14.23□□□□□ -0.13
SYCNQ0VAF6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYCNQ0VAF6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.22□□□□□ -0.13
SYCNQ0VAF6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SYCNQ0VAF6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SYCNQ0VAF6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms