Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 RABEP2-213ENST00000568703 1045 ntTSL 222.27■■□□□ 1.166e-6■■■□□ 18.8
SRSF1Q07955 RABEP2-214ENST00000570030 583 ntTSL 221.59■■□□□ 1.056e-6■■■□□ 18.8
SRSF1Q07955 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.33■■□□□ 1.016e-6■■■□□ 18.8
SRSF1Q07955 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.74■□□□□ 0.756e-6■■■□□ 18.8
SRSF1Q07955 POLE-216ENST00000541213 1675 ntTSL 318.97■□□□□ 0.636e-6■■■□□ 18.8
SRSF1Q07955 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.566e-6■■■□□ 18.8
SRSF1Q07955 RABEP2-207ENST00000562590 2211 ntTSL 1 (best)18.27■□□□□ 0.526e-6■■■□□ 18.8
SRSF1Q07955 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.56e-6■■■□□ 18.8
SRSF1Q07955 SCRN2-213ENST00000584567 932 ntTSL 218■□□□□ 0.476e-6■■■□□ 18.8
SRSF1Q07955 POLE-219ENST00000544414 575 ntTSL 217.79■□□□□ 0.446e-6■■■□□ 18.8
SRSF1Q07955 SCRN2-208ENST00000581645 1477 ntTSL 517.56■□□□□ 0.46e-6■■■□□ 18.8
SRSF1Q07955 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.5■□□□□ 0.396e-6■■■□□ 18.8
SRSF1Q07955 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.35■□□□□ 0.376e-6■■■□□ 18.8
SRSF1Q07955 RABEP2-209ENST00000564473 553 ntTSL 417.32■□□□□ 0.366e-6■■■□□ 18.8
SRSF1Q07955 HSPE1-205ENST00000465573 639 ntTSL 217.24■□□□□ 0.356e-6■■■□□ 18.8
SRSF1Q07955 POLE-204ENST00000441786 556 ntTSL 517.24■□□□□ 0.356e-6■■■□□ 18.8
SRSF1Q07955 HSPE1-207ENST00000495200 537 ntTSL 317.2■□□□□ 0.346e-6■■■□□ 18.8
SRSF1Q07955 HDGFL2-201ENST00000587016 870 ntTSL 316.94■□□□□ 0.36e-6■■■□□ 18.8
SRSF1Q07955 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.36e-6■■■□□ 18.8
SRSF1Q07955 RABEP2-212ENST00000567483 841 ntTSL 216.77■□□□□ 0.286e-6■■■□□ 18.8
SRSF1Q07955 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.73■□□□□ 0.276e-6■■■□□ 18.8
SRSF1Q07955 POLE-221ENST00000544870 659 ntTSL 315.97■□□□□ 0.156e-6■■■□□ 18.8
SRSF1Q07955 POLE-220ENST00000544692 2221 ntTSL 515.9■□□□□ 0.146e-6■■■□□ 18.8
SRSF1Q07955 SCRN2-209ENST00000582459 1624 ntTSL 515.86■□□□□ 0.136e-6■■■□□ 18.8
SRSF1Q07955 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.136e-6■■■□□ 18.8
SRSF1Q07955 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.086e-6■■■□□ 18.8
SRSF1Q07955 RABEP2-208ENST00000563577 589 ntTSL 415.25■□□□□ 0.036e-6■■■□□ 18.8
SRSF1Q07955 RABEP2-206ENST00000562475 560 ntTSL 415.06■□□□□ 06e-6■■■□□ 18.8
SRSF1Q07955 RABEP2-211ENST00000566762 545 ntTSL 414.78□□□□□ -0.046e-6■■■□□ 18.8
SRSF1Q07955 ARVCF-211ENST00000495096 2549 ntTSL 214.63□□□□□ -0.076e-6■■■□□ 18.8
SRSF1Q07955 HDGFL2-207ENST00000615225 3100 ntTSL 513.99□□□□□ -0.176e-6■■■□□ 18.8
SRSF1Q07955 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.226e-6■■■□□ 18.8
SRSF1Q07955 HSPE1-206ENST00000473395 569 ntTSL 213.64□□□□□ -0.236e-6■■■□□ 18.8
SRSF1Q07955 RABEP2-204ENST00000561501 538 ntTSL 413.34□□□□□ -0.276e-6■■■□□ 18.8
SRSF1Q07955 RABEP2-210ENST00000564579 557 ntTSL 313.33□□□□□ -0.286e-6■■■□□ 18.8
SRSF1Q07955 WDR62-205ENST00000587391 5971 ntTSL 1 (best)12.9□□□□□ -0.346e-6■■■□□ 18.8
SRSF1Q07955 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.45□□□□□ -0.421e-6■■■□□ 18.8
SRSF1Q07955 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.446e-6■■■□□ 18.8
SRSF1Q07955 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.491e-6■■■□□ 18.8
SRSF1Q07955 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.7□□□□□ -0.541e-6■■■□□ 18.8
SRSF1Q07955 UBE2Z-204ENST00000506498 766 ntTSL 411.6□□□□□ -0.556e-6■■■□□ 18.8
SRSF1Q07955 TASP1-206ENST00000480436 2302 ntTSL 511.58□□□□□ -0.566e-6■■■□□ 18.8
SRSF1Q07955 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.591e-6■■■□□ 18.8
SRSF1Q07955 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.686e-6■■■□□ 18.8
SRSF1Q07955 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC10.13□□□□□ -0.796e-6■■■□□ 18.8
SRSF1Q07955 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.796e-6■■■□□ 18.8
SRSF1Q07955 WDR62-201ENST00000270301 4632 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.916e-6■■■□□ 18.8
SRSF1Q07955 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.976e-6■■■□□ 18.8
SRSF1Q07955 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC7.05□□□□□ -1.286e-6■■■□□ 18.8
SRSF1Q07955 UBE2Z-207ENST00000513342 4250 ntTSL 26.43□□□□□ -1.386e-6■■■□□ 18.8
SRSF1Q07955 UBE2Z-203ENST00000506271 864 ntTSL 26□□□□□ -1.456e-6■■■□□ 18.8
SRSF1Q07955 UBE2Z-202ENST00000504684 598 ntTSL 45.71□□□□□ -1.56e-6■■■□□ 18.8
SRSF1Q07955 HSPE1-204ENST00000463841 700 ntTSL 24.65□□□□□ -1.676e-6■■■□□ 18.8
SRSF1Q07955 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.716e-6■■■□□ 18.8
SRSF1Q07955 MAD1L1-213ENST00000455998 557 ntTSL 418.42■□□□□ 0.541e-8■■■□□ 18.8
SRSF1Q07955 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.298e-6■■■□□ 18.8
SRSF1Q07955 ACSS2-220ENST00000491533 933 ntTSL 511.09□□□□□ -0.637e-11■■■□□ 18.8
SRSF1Q07955 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.658e-6■■■□□ 18.8
SRSF1Q07955 CC2D1B-205ENST00000460261 2640 ntTSL 1 (best)10.68□□□□□ -0.78e-6■■■□□ 18.8
SRSF1Q07955 ACSS2-219ENST00000490464 280 ntTSL 38.75□□□□□ -1.017e-11■■■□□ 18.8
SRSF1Q07955 CC2D1B-209ENST00000491136 4335 ntTSL 1 (best)8.25□□□□□ -1.098e-6■■■□□ 18.8
SRSF1Q07955 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.31■□□□□ 0.24e-7■■■□□ 18.7
SRSF1Q07955 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC11.43□□□□□ -0.584e-7■■■□□ 18.7
SRSF1Q07955 ATP5B-206ENST00000550162 863 ntTSL 211.92□□□□□ -0.54e-8■■■□□ 18.7
SRSF1Q07955 ATP5B-202ENST00000547250 840 ntTSL 58.33□□□□□ -1.084e-8■■■□□ 18.7
SRSF1Q07955 ATP5B-209ENST00000551570 399 ntTSL 37.37□□□□□ -1.234e-8■■■□□ 18.7
SRSF1Q07955 ATP5B-204ENST00000548474 449 ntTSL 35.9□□□□□ -1.464e-8■■■□□ 18.7
SRSF1Q07955 LUC7L3-217ENST00000510984 505 ntTSL 315.39■□□□□ 0.053e-18■■■□□ 18.7
SRSF1Q07955 LUC7L3-212ENST00000508045 1112 ntTSL 1 (best)14.2□□□□□ -0.143e-18■■■□□ 18.7
SRSF1Q07955 LUC7L3-207ENST00000505619 658 ntTSL 314.2□□□□□ -0.143e-18■■■□□ 18.7
SRSF1Q07955 LUC7L3-206ENST00000504563 840 ntTSL 513.89□□□□□ -0.193e-18■■■□□ 18.7
SRSF1Q07955 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC12.48□□□□□ -0.413e-18■■■□□ 18.7
SRSF1Q07955 LUC7L3-209ENST00000506686 582 ntTSL 411.28□□□□□ -0.63e-18■■■□□ 18.7
SRSF1Q07955 LUC7L3-215ENST00000509335 582 ntTSL 211.28□□□□□ -0.63e-18■■■□□ 18.7
SRSF1Q07955 LUC7L3-213ENST00000508218 533 ntTSL 210.31□□□□□ -0.763e-18■■■□□ 18.7
SRSF1Q07955 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.54e-7■■■□□ 18.7
SRSF1Q07955 PILRB-205ENST00000438231 603 ntTSL 311.88□□□□□ -0.514e-7■■■□□ 18.7
SRSF1Q07955 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.311e-14■■■□□ 18.7
SRSF1Q07955 HSP90B1-207ENST00000550595 694 ntTSL 25.2□□□□□ -1.582e-13■■■□□ 18.7
SRSF1Q07955 C9orf78-206ENST00000492991 478 ntTSL 215.78■□□□□ 0.129e-13■■■□□ 18.7
SRSF1Q07955 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.179e-13■■■□□ 18.7
SRSF1Q07955 C9orf78-202ENST00000461349 783 ntTSL 313.37□□□□□ -0.279e-13■■■□□ 18.7
SRSF1Q07955 C9orf78-203ENST00000461539 637 ntTSL 58.5□□□□□ -1.059e-13■■■□□ 18.7
SRSF1Q07955 PRPF40A-209ENST00000486100 569 ntTSL 417.44■□□□□ 0.382e-15■■■□□ 18.7
SRSF1Q07955 PRPF40A-204ENST00000450303 496 ntTSL 316.11■□□□□ 0.172e-15■■■□□ 18.7
SRSF1Q07955 PRPF40A-211ENST00000493468 1043 ntTSL 1 (best)14.74□□□□□ -0.052e-15■■■□□ 18.7
SRSF1Q07955 PRPF40A-201ENST00000354363 1622 ntTSL 214.11□□□□□ -0.152e-15■■■□□ 18.7
SRSF1Q07955 PRPF40A-212ENST00000545856 1358 ntTSL 1 (best)13.81□□□□□ -0.22e-15■■■□□ 18.7
SRSF1Q07955 PRPF40A-203ENST00000448428 490 ntTSL 511.93□□□□□ -0.52e-15■■■□□ 18.7
SRSF1Q07955 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.912e-15■■■□□ 18.7
SRSF1Q07955 NSUN5P1-205ENST00000455158 806 ntTSL 319.27■□□□□ 0.682e-6■■■□□ 18.7
SRSF1Q07955 NSUN5P1-202ENST00000421140 1535 ntBASIC16.64■□□□□ 0.252e-6■■■□□ 18.7
SRSF1Q07955 NSUN5P1-201ENST00000393633 4792 ntTSL 214.06□□□□□ -0.162e-6■■■□□ 18.7
SRSF1Q07955 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.59□□□□□ -0.232e-6■■■□□ 18.7
SRSF1Q07955 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.53□□□□□ -0.242e-6■■■□□ 18.7
SRSF1Q07955 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.65□□□□□ -0.382e-6■■■□□ 18.7
SRSF1Q07955 ENOSF1-213ENST00000581928 443 ntTSL 213.91□□□□□ -0.189e-7■■■□□ 18.6
SRSF1Q07955 ENOSF1-220ENST00000584706 616 ntTSL 39.24□□□□□ -0.939e-7■■■□□ 18.6
SRSF1Q07955 ENOSF1-214ENST00000582745 1096 ntTSL 27.95□□□□□ -1.149e-7■■■□□ 18.6
SRSF1Q07955 ENOSF1-216ENST00000583973 2057 ntTSL 57.92□□□□□ -1.149e-7■■■□□ 18.6
Retrieved 100 of 14,836 protein–RNA pairs in 136.3 ms