Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPXP78539 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPXP78539 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.77■□□□□ 0.44
SRPXP78539 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPXP78539 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPXP78539 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SRPXP78539 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.77■□□□□ 0.44
SRPXP78539 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.77■□□□□ 0.44
SRPXP78539 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPXP78539 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPXP78539 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRPXP78539 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SRPXP78539 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPXP78539 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRPXP78539 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SRPXP78539 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
SRPXP78539 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.77■□□□□ 0.43
SRPXP78539 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRPXP78539 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.77■□□□□ 0.43
SRPXP78539 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRPXP78539 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRPXP78539 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRPXP78539 LINC01521-201ENST00000504184 1943 ntBASIC17.76■□□□□ 0.43
SRPXP78539 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRPXP78539 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.76■□□□□ 0.43
SRPXP78539 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.76■□□□□ 0.43
SRPXP78539 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRPXP78539 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
SRPXP78539 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRPXP78539 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRPXP78539 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SRPXP78539 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.76■□□□□ 0.43
SRPXP78539 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRPXP78539 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SRPXP78539 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SRPXP78539 AC073130.3-201ENST00000624389 2278 ntBASIC17.75■□□□□ 0.43
SRPXP78539 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRPXP78539 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRPXP78539 FEM1AP4-201ENST00000443167 1987 ntBASIC17.75■□□□□ 0.43
SRPXP78539 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SRPXP78539 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRPXP78539 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SRPXP78539 DUX4L18-201ENST00000553347 1267 ntBASIC17.75■□□□□ 0.43
SRPXP78539 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.75■□□□□ 0.43
SRPXP78539 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRPXP78539 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.75■□□□□ 0.43
SRPXP78539 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRPXP78539 AC004687.1-201ENST00000579003 1625 ntBASIC17.75■□□□□ 0.43
SRPXP78539 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRPXP78539 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SRPXP78539 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SRPXP78539 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRPXP78539 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRPXP78539 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
SRPXP78539 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.74■□□□□ 0.43
SRPXP78539 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SRPXP78539 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.74■□□□□ 0.43
SRPXP78539 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
SRPXP78539 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.74■□□□□ 0.43
SRPXP78539 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.74■□□□□ 0.43
SRPXP78539 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SRPXP78539 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.74■□□□□ 0.43
SRPXP78539 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SRPXP78539 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.74■□□□□ 0.43
SRPXP78539 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRPXP78539 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SRPXP78539 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRPXP78539 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRPXP78539 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRPXP78539 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRPXP78539 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.73■□□□□ 0.43
SRPXP78539 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRPXP78539 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.73■□□□□ 0.43
SRPXP78539 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRPXP78539 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SRPXP78539 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRPXP78539 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRPXP78539 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRPXP78539 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SRPXP78539 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRPXP78539 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRPXP78539 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRPXP78539 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRPXP78539 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SRPXP78539 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms