Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 OXCT2P1-201ENST00000447263 1535 ntBASIC26.03■■□□□ 1.76
CNTNAP1P78357 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
CNTNAP1P78357 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CNTNAP1P78357 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.03■■□□□ 1.76
CNTNAP1P78357 RARRES2P4-201ENST00000514074 484 ntBASIC26.03■■□□□ 1.76
CNTNAP1P78357 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.03■■□□□ 1.76
CNTNAP1P78357 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CNTNAP1P78357 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CNTNAP1P78357 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.02■■□□□ 1.76
CNTNAP1P78357 AL158047.1-201ENST00000445918 881 ntBASIC26.02■■□□□ 1.76
CNTNAP1P78357 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.02■■□□□ 1.76
CNTNAP1P78357 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CNTNAP1P78357 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.02■■□□□ 1.76
CNTNAP1P78357 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CNTNAP1P78357 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CNTNAP1P78357 PARP1-202ENST00000366792 553 ntTSL 3 BASIC26.01■■□□□ 1.75
CNTNAP1P78357 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.01■■□□□ 1.75
CNTNAP1P78357 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.01■■□□□ 1.75
CNTNAP1P78357 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.01■■□□□ 1.75
CNTNAP1P78357 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
CNTNAP1P78357 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC26.01■■□□□ 1.75
CNTNAP1P78357 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CNTNAP1P78357 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CNTNAP1P78357 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26■■□□□ 1.75
CNTNAP1P78357 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26■■□□□ 1.75
CNTNAP1P78357 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CNTNAP1P78357 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26■■□□□ 1.75
CNTNAP1P78357 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
CNTNAP1P78357 ADM-205ENST00000528544 586 ntTSL 2 BASIC26■■□□□ 1.75
CNTNAP1P78357 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26■■□□□ 1.75
CNTNAP1P78357 UBE2DNL-204ENST00000602536 740 ntBASIC26■■□□□ 1.75
CNTNAP1P78357 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CNTNAP1P78357 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CNTNAP1P78357 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26■■□□□ 1.75
CNTNAP1P78357 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CNTNAP1P78357 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26■■□□□ 1.75
CNTNAP1P78357 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.99■■□□□ 1.75
CNTNAP1P78357 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CNTNAP1P78357 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC25.99■■□□□ 1.75
CNTNAP1P78357 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.99■■□□□ 1.75
CNTNAP1P78357 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CNTNAP1P78357 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CNTNAP1P78357 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CNTNAP1P78357 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CNTNAP1P78357 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CNTNAP1P78357 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.98■■□□□ 1.75
CNTNAP1P78357 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CNTNAP1P78357 FAM210CP-201ENST00000445714 574 ntBASIC25.98■■□□□ 1.75
CNTNAP1P78357 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.98■■□□□ 1.75
CNTNAP1P78357 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.98■■□□□ 1.75
CNTNAP1P78357 AC010331.1-201ENST00000611423 582 ntBASIC25.98■■□□□ 1.75
CNTNAP1P78357 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CNTNAP1P78357 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CNTNAP1P78357 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CNTNAP1P78357 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.98■■□□□ 1.75
CNTNAP1P78357 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.98■■□□□ 1.75
CNTNAP1P78357 AC142381.4-202ENST00000563973 229 ntBASIC25.97■■□□□ 1.75
CNTNAP1P78357 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.97■■□□□ 1.75
CNTNAP1P78357 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CNTNAP1P78357 DUSP8P3-201ENST00000399571 1760 ntBASIC25.97■■□□□ 1.75
CNTNAP1P78357 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CNTNAP1P78357 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CNTNAP1P78357 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.97■■□□□ 1.75
CNTNAP1P78357 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CNTNAP1P78357 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.97■■□□□ 1.75
CNTNAP1P78357 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.97■■□□□ 1.75
CNTNAP1P78357 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CNTNAP1P78357 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.96■■□□□ 1.75
CNTNAP1P78357 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CNTNAP1P78357 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CNTNAP1P78357 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CNTNAP1P78357 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CNTNAP1P78357 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CNTNAP1P78357 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CNTNAP1P78357 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
CNTNAP1P78357 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CNTNAP1P78357 CNN2P6-201ENST00000439038 900 ntBASIC25.95■■□□□ 1.75
CNTNAP1P78357 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CNTNAP1P78357 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CNTNAP1P78357 AC092118.2-201ENST00000613495 667 ntBASIC25.95■■□□□ 1.75
CNTNAP1P78357 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
CNTNAP1P78357 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.95■■□□□ 1.74
CNTNAP1P78357 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
CNTNAP1P78357 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
CNTNAP1P78357 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.95■■□□□ 1.74
CNTNAP1P78357 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC25.95■■□□□ 1.74
CNTNAP1P78357 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.95■■□□□ 1.74
CNTNAP1P78357 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
CNTNAP1P78357 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.95■■□□□ 1.74
CNTNAP1P78357 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CNTNAP1P78357 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CNTNAP1P78357 ESRRAP1-201ENST00000400596 1257 ntBASIC25.94■■□□□ 1.74
CNTNAP1P78357 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.94■■□□□ 1.74
CNTNAP1P78357 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.94■■□□□ 1.74
CNTNAP1P78357 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC25.94■■□□□ 1.74
CNTNAP1P78357 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.94■■□□□ 1.74
CNTNAP1P78357 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.94■■□□□ 1.74
CNTNAP1P78357 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.94■■□□□ 1.74
CNTNAP1P78357 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CNTNAP1P78357 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms