Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC28.38■■■□□ 2.13
RIPK4P57078 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC28.38■■■□□ 2.13
RIPK4P57078 TERF1P2-201ENST00000583350 1212 ntBASIC28.38■■■□□ 2.13
RIPK4P57078 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.38■■■□□ 2.13
RIPK4P57078 DUX4L6-201ENST00000626483 1275 ntBASIC28.38■■■□□ 2.13
RIPK4P57078 DUX4L1-201ENST00000627662 1275 ntBASIC28.38■■■□□ 2.13
RIPK4P57078 DUX4L8-201ENST00000629013 1275 ntBASIC28.38■■■□□ 2.13
RIPK4P57078 DUX4L3-201ENST00000630187 1275 ntBASIC28.38■■■□□ 2.13
RIPK4P57078 DUX4L7-201ENST00000630678 1275 ntBASIC28.38■■■□□ 2.13
RIPK4P57078 DUX4L5-201ENST00000630834 1275 ntBASIC28.38■■■□□ 2.13
RIPK4P57078 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
RIPK4P57078 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
RIPK4P57078 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC28.37■■■□□ 2.13
RIPK4P57078 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC28.37■■■□□ 2.13
RIPK4P57078 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
RIPK4P57078 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
RIPK4P57078 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
RIPK4P57078 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC28.37■■■□□ 2.13
RIPK4P57078 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
RIPK4P57078 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC28.37■■■□□ 2.13
RIPK4P57078 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RIPK4P57078 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RIPK4P57078 PXK-203ENST00000383715 1756 ntTSL 5 BASIC28.37■■■□□ 2.13
RIPK4P57078 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIPK4P57078 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC28.36■■■□□ 2.13
RIPK4P57078 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIPK4P57078 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.36■■■□□ 2.13
RIPK4P57078 ANKRD20A6P-201ENST00000618763 204 ntBASIC28.36■■■□□ 2.13
RIPK4P57078 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC28.36■■■□□ 2.13
RIPK4P57078 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC28.36■■■□□ 2.13
RIPK4P57078 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC28.36■■■□□ 2.13
RIPK4P57078 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC28.36■■■□□ 2.13
RIPK4P57078 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC28.36■■■□□ 2.13
RIPK4P57078 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
RIPK4P57078 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC28.36■■■□□ 2.13
RIPK4P57078 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIPK4P57078 AP004607.7-201ENST00000527152 1677 ntBASIC28.35■■■□□ 2.13
RIPK4P57078 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RIPK4P57078 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC28.35■■■□□ 2.13
RIPK4P57078 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RIPK4P57078 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RIPK4P57078 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RIPK4P57078 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RIPK4P57078 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC28.35■■■□□ 2.13
RIPK4P57078 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
RIPK4P57078 AC133561.1-201ENST00000568600 2415 ntBASIC28.34■■■□□ 2.13
RIPK4P57078 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
RIPK4P57078 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RIPK4P57078 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
RIPK4P57078 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIPK4P57078 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
RIPK4P57078 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
RIPK4P57078 AC034268.1-201ENST00000441047 882 ntBASIC28.34■■■□□ 2.13
RIPK4P57078 KRT18P14-201ENST00000534205 1250 ntBASIC28.34■■■□□ 2.13
RIPK4P57078 AC233723.2-201ENST00000623798 2106 ntBASIC28.34■■■□□ 2.13
RIPK4P57078 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
RIPK4P57078 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC28.34■■■□□ 2.13
RIPK4P57078 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RIPK4P57078 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RIPK4P57078 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC28.33■■■□□ 2.13
RIPK4P57078 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
RIPK4P57078 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
RIPK4P57078 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
RIPK4P57078 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RIPK4P57078 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
RIPK4P57078 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RIPK4P57078 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RIPK4P57078 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RIPK4P57078 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RIPK4P57078 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.32■■■□□ 2.12
RIPK4P57078 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC28.32■■■□□ 2.12
RIPK4P57078 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RIPK4P57078 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RIPK4P57078 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC28.32■■■□□ 2.12
RIPK4P57078 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC28.32■■■□□ 2.12
RIPK4P57078 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RIPK4P57078 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
RIPK4P57078 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC28.32■■■□□ 2.12
RIPK4P57078 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC28.31■■■□□ 2.12
RIPK4P57078 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
RIPK4P57078 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
RIPK4P57078 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC28.31■■■□□ 2.12
RIPK4P57078 AL162430.1-201ENST00000480705 870 ntBASIC28.31■■■□□ 2.12
RIPK4P57078 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RIPK4P57078 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.31■■■□□ 2.12
RIPK4P57078 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.31■■■□□ 2.12
RIPK4P57078 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
RIPK4P57078 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC28.31■■■□□ 2.12
RIPK4P57078 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RIPK4P57078 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RIPK4P57078 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC28.31■■■□□ 2.12
RIPK4P57078 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
RIPK4P57078 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RIPK4P57078 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RIPK4P57078 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC28.3■■■□□ 2.12
RIPK4P57078 AC005224.4-201ENST00000583262 1652 ntBASIC28.3■■■□□ 2.12
RIPK4P57078 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RIPK4P57078 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC28.3■■■□□ 2.12
RIPK4P57078 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
RIPK4P57078 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC28.3■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms