Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLDN20P56880 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLDN20P56880 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLDN20P56880 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN20P56880 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN20P56880 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN20P56880 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CLDN20P56880 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CLDN20P56880 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN20P56880 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLDN20P56880 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN20P56880 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN20P56880 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CLDN20P56880 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN20P56880 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN20P56880 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN20P56880 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.75■□□□□ 0.75
CLDN20P56880 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.75■□□□□ 0.75
CLDN20P56880 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN20P56880 IGHV3-19-201ENST00000521488 291 ntBASIC19.75■□□□□ 0.75
CLDN20P56880 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN20P56880 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDN20P56880 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN20P56880 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CLDN20P56880 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN20P56880 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN20P56880 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN20P56880 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN20P56880 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLDN20P56880 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN20P56880 AP005435.1-201ENST00000529293 1178 ntBASIC19.74■□□□□ 0.75
CLDN20P56880 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN20P56880 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN20P56880 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
CLDN20P56880 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN20P56880 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CLDN20P56880 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN20P56880 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CLDN20P56880 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN20P56880 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN20P56880 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CLDN20P56880 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN20P56880 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLDN20P56880 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN20P56880 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN20P56880 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN20P56880 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN20P56880 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN20P56880 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDN20P56880 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN20P56880 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN20P56880 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN20P56880 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN20P56880 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLDN20P56880 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CLDN20P56880 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN20P56880 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN20P56880 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN20P56880 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN20P56880 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN20P56880 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN20P56880 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN20P56880 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN20P56880 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN20P56880 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN20P56880 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
CLDN20P56880 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CLDN20P56880 AL031602.1-201ENST00000633169 911 ntBASIC19.72■□□□□ 0.75
CLDN20P56880 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN20P56880 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CLDN20P56880 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN20P56880 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN20P56880 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN20P56880 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN20P56880 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.72■□□□□ 0.75
CLDN20P56880 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN20P56880 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN20P56880 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN20P56880 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN20P56880 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN20P56880 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN20P56880 IRS3P-201ENST00000223076 1006 ntBASIC19.71■□□□□ 0.75
CLDN20P56880 MIR935-201ENST00000401179 91 ntBASIC19.71■□□□□ 0.75
CLDN20P56880 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.71■□□□□ 0.75
CLDN20P56880 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN20P56880 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN20P56880 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN20P56880 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CLDN20P56880 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN20P56880 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN20P56880 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN20P56880 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN20P56880 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.74
CLDN20P56880 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN20P56880 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN20P56880 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN20P56880 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN20P56880 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLDN20P56880 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN20P56880 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms