Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
ATP1B3P54709 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP1B3P54709 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP1B3P54709 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP1B3P54709 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP1B3P54709 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATP1B3P54709 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP1B3P54709 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP1B3P54709 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ATP1B3P54709 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP1B3P54709 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP1B3P54709 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP1B3P54709 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP1B3P54709 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP1B3P54709 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.67■□□□□ 0.58
ATP1B3P54709 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ATP1B3P54709 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1B3P54709 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1B3P54709 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1B3P54709 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1B3P54709 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1B3P54709 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP1B3P54709 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.67■□□□□ 0.58
ATP1B3P54709 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP1B3P54709 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1B3P54709 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1B3P54709 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1B3P54709 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1B3P54709 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1B3P54709 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1B3P54709 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1B3P54709 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ATP1B3P54709 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1B3P54709 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP1B3P54709 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
ATP1B3P54709 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1B3P54709 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP1B3P54709 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ATP1B3P54709 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1B3P54709 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1B3P54709 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1B3P54709 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1B3P54709 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATP1B3P54709 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1B3P54709 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1B3P54709 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1B3P54709 GUSBP5-201ENST00000418136 578 ntBASIC18.65■□□□□ 0.58
ATP1B3P54709 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.65■□□□□ 0.58
ATP1B3P54709 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.65■□□□□ 0.58
ATP1B3P54709 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1B3P54709 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1B3P54709 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP1B3P54709 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1B3P54709 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP1B3P54709 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ATP1B3P54709 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ATP1B3P54709 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP1B3P54709 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1B3P54709 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1B3P54709 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1B3P54709 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP1B3P54709 pRNA.6-201ENST00000610482 90 ntBASIC18.64■□□□□ 0.57
ATP1B3P54709 pRNA.5-201ENST00000612139 90 ntBASIC18.64■□□□□ 0.57
ATP1B3P54709 pRNA.11-201ENST00000618423 90 ntBASIC18.64■□□□□ 0.57
ATP1B3P54709 pRNA.13-201ENST00000619112 90 ntBASIC18.64■□□□□ 0.57
ATP1B3P54709 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP1B3P54709 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1B3P54709 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1B3P54709 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1B3P54709 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1B3P54709 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP1B3P54709 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1B3P54709 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1B3P54709 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.64■□□□□ 0.57
ATP1B3P54709 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP1B3P54709 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ATP1B3P54709 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP1B3P54709 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ATP1B3P54709 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ATP1B3P54709 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP1B3P54709 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP1B3P54709 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP1B3P54709 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ATP1B3P54709 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP1B3P54709 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP1B3P54709 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ATP1B3P54709 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP1B3P54709 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP1B3P54709 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP1B3P54709 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP1B3P54709 AC133637.1-201ENST00000624115 1537 ntBASIC18.63■□□□□ 0.57
ATP1B3P54709 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP1B3P54709 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP1B3P54709 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP1B3P54709 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP1B3P54709 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP1B3P54709 MIR3621-201ENST00000580529 85 ntBASIC18.62■□□□□ 0.57
ATP1B3P54709 AC099791.2-201ENST00000605725 427 ntBASIC18.62■□□□□ 0.57
ATP1B3P54709 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP1B3P54709 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms