Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 BCK2YER167W 2556 nt3.96□□□□□ -1.78
RPT4P53549 AIM14YGL160W 1713 nt3.95□□□□□ -1.78
RPT4P53549 RPS11AYDR025W 471 nt3.95□□□□□ -1.78
RPT4P53549 SHU2YDR078C 672 nt3.95□□□□□ -1.78
RPT4P53549 SEC53YFL045C 765 nt3.95□□□□□ -1.78
RPT4P53549 DDI2YFL061W 678 nt3.95□□□□□ -1.78
RPT4P53549 YGL074CYGL074C 327 nt3.95□□□□□ -1.78
RPT4P53549 TOS8YGL096W 831 nt3.95□□□□□ -1.78
RPT4P53549 YGL258W-AYGL258W-A 234 nt3.95□□□□□ -1.78
RPT4P53549 COS8YHL048W 1146 nt3.95□□□□□ -1.78
RPT4P53549 TFA2YKR062W 987 nt3.95□□□□□ -1.78
RPT4P53549 YAL065CYAL065C 387 nt3.95□□□□□ -1.78
RPT4P53549 YLR428CYLR428C 345 nt3.95□□□□□ -1.78
RPT4P53549 MRPL16YBL038W 699 nt3.95□□□□□ -1.78
RPT4P53549 YMR306C-AYMR306C-A 390 nt3.95□□□□□ -1.78
RPT4P53549 YMR316C-AYMR316C-A 312 nt3.95□□□□□ -1.78
RPT4P53549 INN1YNL152W 1230 nt3.95□□□□□ -1.78
RPT4P53549 DDI3YNL335W 678 nt3.95□□□□□ -1.78
RPT4P53549 VID27YNL212W 2349 nt3.95□□□□□ -1.78
RPT4P53549 ELM1YKL048C 1923 nt3.95□□□□□ -1.78
RPT4P53549 TRM1YDR120C 1713 nt3.95□□□□□ -1.78
RPT4P53549 MGR3YMR115W 1506 nt3.95□□□□□ -1.78
RPT4P53549 VHS3YOR054C 2025 nt3.94□□□□□ -1.78
RPT4P53549 NOP6YDL213C 678 nt3.94□□□□□ -1.78
RPT4P53549 CTH1YDR151C 978 nt3.94□□□□□ -1.78
RPT4P53549 BIO2YGR286C 1128 nt3.94□□□□□ -1.78
RPT4P53549 COX23YHR116W 456 nt3.94□□□□□ -1.78
RPT4P53549 GCD14YJL125C 1152 nt3.94□□□□□ -1.78
RPT4P53549 MTD1YKR080W 963 nt3.94□□□□□ -1.78
RPT4P53549 YNR071CYNR071C 1029 nt3.94□□□□□ -1.78
RPT4P53549 TRE2YOR256C 2430 nt3.94□□□□□ -1.78
RPT4P53549 BUD5YCR038C 1929 nt3.93□□□□□ -1.78
RPT4P53549 PPZ1YML016C 2079 nt3.93□□□□□ -1.78
RPT4P53549 YCL076WYCL076W 744 nt3.93□□□□□ -1.78
RPT4P53549 YPT53YNL093W 663 nt3.93□□□□□ -1.78
RPT4P53549 MDJ2YNL328C 441 nt3.93□□□□□ -1.78
RPT4P53549 GRX1YCL035C 333 nt3.93□□□□□ -1.78
RPT4P53549 TAF7YMR227C 1773 nt3.93□□□□□ -1.78
RPT4P53549 MEF1YLR069C 2286 nt3.93□□□□□ -1.78
RPT4P53549 SKP2YNL311C 2292 nt3.93□□□□□ -1.78
RPT4P53549 YKR015CYKR015C 1707 nt3.92□□□□□ -1.78
RPT4P53549 RSC3YDR303C 2658 nt3.92□□□□□ -1.78
RPT4P53549 MPC1YGL080W 393 nt3.92□□□□□ -1.78
RPT4P53549 IMP3YHR148W 552 nt3.92□□□□□ -1.78
RPT4P53549 EBP2YKL172W 1284 nt3.92□□□□□ -1.78
RPT4P53549 YMR178WYMR178W 825 nt3.92□□□□□ -1.78
RPT4P53549 YPL077CYPL077C 723 nt3.92□□□□□ -1.78
RPT4P53549 PRP9YDL030W 1593 nt3.92□□□□□ -1.78
RPT4P53549 PTM1YKL039W 1572 nt3.92□□□□□ -1.78
RPT4P53549 RTS1YOR014W 2274 nt3.91□□□□□ -1.78
RPT4P53549 ZDS1YMR273C 2748 nt3.91□□□□□ -1.78
RPT4P53549 ALA1YOR335C 2877 nt3.91□□□□□ -1.78
RPT4P53549 YCR015CYCR015C 954 nt3.91□□□□□ -1.78
RPT4P53549 MBB1YJL199C 327 nt3.91□□□□□ -1.78
RPT4P53549 YLR012CYLR012C 300 nt3.91□□□□□ -1.78
RPT4P53549 PSY3YLR376C 729 nt3.91□□□□□ -1.78
RPT4P53549 YOL166CYOL166C 339 nt3.91□□□□□ -1.78
RPT4P53549 snR42snR42 351 nt3.91□□□□□ -1.78
RPT4P53549 DSF2YBR007C 2211 nt3.9□□□□□ -1.78
RPT4P53549 SPT23YKL020C 3249 nt3.9□□□□□ -1.78
RPT4P53549 YCR007CYCR007C 720 nt3.9□□□□□ -1.79
RPT4P53549 RPS8BYER102W 603 nt3.9□□□□□ -1.79
RPT4P53549 AIM22YJL046W 1230 nt3.9□□□□□ -1.79
RPT4P53549 YJL175WYJL175W 513 nt3.9□□□□□ -1.79
RPT4P53549 LAC1YKL008C 1257 nt3.9□□□□□ -1.79
RPT4P53549 RPS8AYBL072C 603 nt3.9□□□□□ -1.79
RPT4P53549 AAH1YNL141W 1044 nt3.9□□□□□ -1.79
RPT4P53549 IST1YNL265C 897 nt3.9□□□□□ -1.79
RPT4P53549 CYC2YOR037W 1101 nt3.9□□□□□ -1.79
RPT4P53549 PRS5YOL061W 1491 nt3.9□□□□□ -1.79
RPT4P53549 YFL040WYFL040W 1623 nt3.89□□□□□ -1.79
RPT4P53549 YDR250CYDR250C 276 nt3.89□□□□□ -1.79
RPT4P53549 YDR336WYDR336W 945 nt3.89□□□□□ -1.79
RPT4P53549 NKP1YDR383C 717 nt3.89□□□□□ -1.79
RPT4P53549 KEG1YFR042W 603 nt3.89□□□□□ -1.79
RPT4P53549 YGL188CYGL188C 174 nt3.89□□□□□ -1.79
RPT4P53549 ERV29YGR284C 933 nt3.89□□□□□ -1.79
RPT4P53549 PAM18YLR008C 507 nt3.89□□□□□ -1.79
RPT4P53549 MUM2YBR057C 1101 nt3.89□□□□□ -1.79
RPT4P53549 NIP7YPL211W 546 nt3.89□□□□□ -1.79
RPT4P53549 MCM16YPR046W 546 nt3.89□□□□□ -1.79
RPT4P53549 FRM2YCL026C-A 582 nt3.89□□□□□ -1.79
RPT4P53549 VPS27YNR006W 1869 nt3.89□□□□□ -1.79
RPT4P53549 RAD1YPL022W 3303 nt3.89□□□□□ -1.79
RPT4P53549 CLG1YGL215W 1359 nt3.89□□□□□ -1.79
RPT4P53549 YTM1YOR272W 1383 nt3.89□□□□□ -1.79
RPT4P53549 ACK1YDL203C 1872 nt3.88□□□□□ -1.79
RPT4P53549 YHI9YHR029C 885 nt3.88□□□□□ -1.79
RPT4P53549 RSM25YIL093C 795 nt3.88□□□□□ -1.79
RPT4P53549 YAL064W-BYAL064W-B 381 nt3.88□□□□□ -1.79
RPT4P53549 YLL047WYLL047W 384 nt3.88□□□□□ -1.79
RPT4P53549 COA4YLR218C 453 nt3.88□□□□□ -1.79
RPT4P53549 YML053CYML053C 639 nt3.88□□□□□ -1.79
RPT4P53549 TMC1YOR052C 453 nt3.88□□□□□ -1.79
RPT4P53549 YBR141W-AYBR141W-A 96 nt3.88□□□□□ -1.79
RPT4P53549 KAR5YMR065W 1515 nt3.88□□□□□ -1.79
RPT4P53549 PST1YDR055W 1335 nt3.88□□□□□ -1.79
RPT4P53549 RPA135YPR010C 3612 nt3.87□□□□□ -1.79
RPT4P53549 RRP8YDR083W 1179 nt3.87□□□□□ -1.79
RPT4P53549 YNL162W-AYNL162W-A 219 nt3.87□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 23.5 ms