Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC30.31■■■□□ 2.44
MSH6P52701 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC30.31■■■□□ 2.44
MSH6P52701 AC138907.5-202ENST00000569484 235 ntBASIC30.31■■■□□ 2.44
MSH6P52701 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC30.31■■■□□ 2.44
MSH6P52701 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC30.31■■■□□ 2.44
MSH6P52701 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
MSH6P52701 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
MSH6P52701 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.31■■■□□ 2.44
MSH6P52701 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC30.3■■■□□ 2.44
MSH6P52701 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
MSH6P52701 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
MSH6P52701 AC093787.1-201ENST00000450396 207 ntBASIC30.3■■■□□ 2.44
MSH6P52701 AC007322.4-201ENST00000509611 723 ntBASIC30.3■■■□□ 2.44
MSH6P52701 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC30.3■■■□□ 2.44
MSH6P52701 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
MSH6P52701 PXK-203ENST00000383715 1756 ntTSL 5 BASIC30.3■■■□□ 2.44
MSH6P52701 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
MSH6P52701 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
MSH6P52701 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC30.29■■■□□ 2.44
MSH6P52701 TERF1P5-201ENST00000477545 1207 ntBASIC30.29■■■□□ 2.44
MSH6P52701 MMD2-204ENST00000612910 778 ntTSL 5 BASIC30.29■■■□□ 2.44
MSH6P52701 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC30.29■■■□□ 2.44
MSH6P52701 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC30.28■■■□□ 2.44
MSH6P52701 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC30.28■■■□□ 2.44
MSH6P52701 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC30.28■■■□□ 2.44
MSH6P52701 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
MSH6P52701 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
MSH6P52701 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
MSH6P52701 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
MSH6P52701 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
MSH6P52701 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC30.28■■■□□ 2.44
MSH6P52701 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC30.28■■■□□ 2.44
MSH6P52701 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC30.28■■■□□ 2.44
MSH6P52701 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
MSH6P52701 MMAB-206ENST00000540016 945 ntTSL 3 BASIC30.28■■■□□ 2.44
MSH6P52701 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC30.28■■■□□ 2.44
MSH6P52701 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC30.28■■■□□ 2.44
MSH6P52701 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC30.28■■■□□ 2.44
MSH6P52701 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC30.27■■■□□ 2.44
MSH6P52701 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC30.27■■■□□ 2.44
MSH6P52701 USP36-216ENST00000589424 970 ntTSL 5 BASIC30.27■■■□□ 2.44
MSH6P52701 AC016405.3-201ENST00000607710 860 ntBASIC30.27■■■□□ 2.44
MSH6P52701 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC30.26■■■□□ 2.43
MSH6P52701 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC30.26■■■□□ 2.43
MSH6P52701 AL512625.2-201ENST00000417533 625 ntBASIC30.26■■■□□ 2.43
MSH6P52701 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC30.26■■■□□ 2.43
MSH6P52701 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC30.26■■■□□ 2.43
MSH6P52701 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
MSH6P52701 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
MSH6P52701 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
MSH6P52701 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC30.25■■■□□ 2.43
MSH6P52701 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
MSH6P52701 BX276092.2-201ENST00000417668 665 ntBASIC30.25■■■□□ 2.43
MSH6P52701 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC30.25■■■□□ 2.43
MSH6P52701 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC30.25■■■□□ 2.43
MSH6P52701 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
MSH6P52701 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC30.25■■■□□ 2.43
MSH6P52701 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
MSH6P52701 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
MSH6P52701 AC055733.4-201ENST00000638462 1354 ntBASIC30.24■■■□□ 2.43
MSH6P52701 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC30.24■■■□□ 2.43
MSH6P52701 AC097658.1-201ENST00000475555 843 ntBASIC30.24■■■□□ 2.43
MSH6P52701 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
MSH6P52701 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC30.24■■■□□ 2.43
MSH6P52701 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC30.24■■■□□ 2.43
MSH6P52701 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC30.24■■■□□ 2.43
MSH6P52701 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC30.24■■■□□ 2.43
MSH6P52701 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
MSH6P52701 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
MSH6P52701 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC30.23■■■□□ 2.43
MSH6P52701 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
MSH6P52701 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
MSH6P52701 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
MSH6P52701 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
MSH6P52701 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC30.23■■■□□ 2.43
MSH6P52701 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
MSH6P52701 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC30.23■■■□□ 2.43
MSH6P52701 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
MSH6P52701 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
MSH6P52701 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
MSH6P52701 AC079630.1-202ENST00000618127 1840 ntBASIC30.22■■■□□ 2.43
MSH6P52701 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
MSH6P52701 AC008550.1-201ENST00000511500 884 ntBASIC30.22■■■□□ 2.43
MSH6P52701 AC069236.1-201ENST00000604339 616 ntBASIC30.22■■■□□ 2.43
MSH6P52701 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC30.22■■■□□ 2.43
MSH6P52701 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC30.22■■■□□ 2.43
MSH6P52701 AC008694.1-202ENST00000636953 945 ntBASIC30.22■■■□□ 2.43
MSH6P52701 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC30.22■■■□□ 2.43
MSH6P52701 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC30.22■■■□□ 2.43
MSH6P52701 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC30.22■■■□□ 2.43
MSH6P52701 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC30.22■■■□□ 2.43
MSH6P52701 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
MSH6P52701 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC30.21■■■□□ 2.43
MSH6P52701 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
MSH6P52701 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC30.21■■■□□ 2.43
MSH6P52701 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
MSH6P52701 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
MSH6P52701 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC30.21■■■□□ 2.43
MSH6P52701 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC30.21■■■□□ 2.43
MSH6P52701 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC30.21■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms