Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2A1P52655 AC098818.2-201ENST00000564925 2320 ntBASIC21.12■□□□□ 0.97
GTF2A1P52655 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2A1P52655 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
GTF2A1P52655 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
GTF2A1P52655 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.12■□□□□ 0.97
GTF2A1P52655 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
GTF2A1P52655 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
GTF2A1P52655 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2A1P52655 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2A1P52655 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2A1P52655 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2A1P52655 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2A1P52655 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.11■□□□□ 0.97
GTF2A1P52655 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
GTF2A1P52655 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
GTF2A1P52655 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2A1P52655 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2A1P52655 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
GTF2A1P52655 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2A1P52655 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2A1P52655 AC008813.1-201ENST00000536597 885 ntBASIC21.11■□□□□ 0.97
GTF2A1P52655 AC148477.6-201ENST00000623746 465 ntBASIC21.11■□□□□ 0.97
GTF2A1P52655 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
GTF2A1P52655 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
GTF2A1P52655 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2A1P52655 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.11■□□□□ 0.97
GTF2A1P52655 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2A1P52655 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.11■□□□□ 0.97
GTF2A1P52655 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2A1P52655 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2A1P52655 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2A1P52655 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
GTF2A1P52655 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2A1P52655 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.1■□□□□ 0.97
GTF2A1P52655 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.1■□□□□ 0.97
GTF2A1P52655 DUX4L13-201ENST00000554103 1267 ntBASIC21.1■□□□□ 0.97
GTF2A1P52655 DUX4L15-201ENST00000611059 1267 ntBASIC21.1■□□□□ 0.97
GTF2A1P52655 DUX4L23-201ENST00000615195 1269 ntBASIC21.1■□□□□ 0.97
GTF2A1P52655 DUX4L24-201ENST00000617576 1269 ntBASIC21.1■□□□□ 0.97
GTF2A1P52655 LINC01971-201ENST00000617888 1048 ntBASIC21.1■□□□□ 0.97
GTF2A1P52655 DUX4L22-201ENST00000618238 1269 ntBASIC21.1■□□□□ 0.97
GTF2A1P52655 DUX4L20-201ENST00000619712 1269 ntBASIC21.1■□□□□ 0.97
GTF2A1P52655 DUX4L21-201ENST00000622058 1269 ntBASIC21.1■□□□□ 0.97
GTF2A1P52655 DUX4L10-201ENST00000622460 1267 ntBASIC21.1■□□□□ 0.97
GTF2A1P52655 DUX4L25-201ENST00000624915 1269 ntBASIC21.1■□□□□ 0.97
GTF2A1P52655 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.1■□□□□ 0.97
GTF2A1P52655 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
GTF2A1P52655 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.1■□□□□ 0.97
GTF2A1P52655 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2A1P52655 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2A1P52655 AC010542.4-201ENST00000563151 1910 ntBASIC21.1■□□□□ 0.97
GTF2A1P52655 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
GTF2A1P52655 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.09■□□□□ 0.97
GTF2A1P52655 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2A1P52655 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2A1P52655 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2A1P52655 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.09■□□□□ 0.97
GTF2A1P52655 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.09■□□□□ 0.97
GTF2A1P52655 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2A1P52655 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2A1P52655 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2A1P52655 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.09■□□□□ 0.97
GTF2A1P52655 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.09■□□□□ 0.97
GTF2A1P52655 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2A1P52655 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2A1P52655 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
GTF2A1P52655 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GTF2A1P52655 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
GTF2A1P52655 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GTF2A1P52655 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GTF2A1P52655 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GTF2A1P52655 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GTF2A1P52655 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
GTF2A1P52655 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GTF2A1P52655 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
GTF2A1P52655 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.08■□□□□ 0.96
GTF2A1P52655 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.96
GTF2A1P52655 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF2A1P52655 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GTF2A1P52655 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF2A1P52655 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF2A1P52655 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
GTF2A1P52655 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GTF2A1P52655 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
GTF2A1P52655 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF2A1P52655 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF2A1P52655 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GTF2A1P52655 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
GTF2A1P52655 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.07■□□□□ 0.96
GTF2A1P52655 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF2A1P52655 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
GTF2A1P52655 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
GTF2A1P52655 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.07■□□□□ 0.96
GTF2A1P52655 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF2A1P52655 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GTF2A1P52655 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
GTF2A1P52655 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GTF2A1P52655 FZD10-202ENST00000539839 3282 ntBASIC21.06■□□□□ 0.96
GTF2A1P52655 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms