Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCR9P51686 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCR9P51686 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCR9P51686 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCR9P51686 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCR9P51686 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCR9P51686 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.98■□□□□ 0.63
CCR9P51686 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCR9P51686 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCR9P51686 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCR9P51686 AC010997.5-201ENST00000609182 354 ntBASIC18.98■□□□□ 0.63
CCR9P51686 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCR9P51686 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CCR9P51686 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.98■□□□□ 0.63
CCR9P51686 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.98■□□□□ 0.63
CCR9P51686 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCR9P51686 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCR9P51686 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCR9P51686 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.97■□□□□ 0.63
CCR9P51686 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCR9P51686 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCR9P51686 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCR9P51686 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCR9P51686 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCR9P51686 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCR9P51686 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
CCR9P51686 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCR9P51686 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCR9P51686 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCR9P51686 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCR9P51686 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.97■□□□□ 0.63
CCR9P51686 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCR9P51686 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCR9P51686 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.96■□□□□ 0.63
CCR9P51686 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.96■□□□□ 0.63
CCR9P51686 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCR9P51686 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCR9P51686 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCR9P51686 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCR9P51686 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CCR9P51686 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCR9P51686 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCR9P51686 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCR9P51686 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCR9P51686 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCR9P51686 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CCR9P51686 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCR9P51686 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCR9P51686 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCR9P51686 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.95■□□□□ 0.62
CCR9P51686 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CCR9P51686 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCR9P51686 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCR9P51686 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCR9P51686 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCR9P51686 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCR9P51686 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCR9P51686 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCR9P51686 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCR9P51686 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.95■□□□□ 0.62
CCR9P51686 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCR9P51686 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCR9P51686 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCR9P51686 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCR9P51686 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.94■□□□□ 0.62
CCR9P51686 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCR9P51686 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCR9P51686 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCR9P51686 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCR9P51686 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCR9P51686 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCR9P51686 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
CCR9P51686 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCR9P51686 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCR9P51686 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCR9P51686 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCR9P51686 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCR9P51686 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.93■□□□□ 0.62
CCR9P51686 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCR9P51686 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCR9P51686 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCR9P51686 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCR9P51686 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.93■□□□□ 0.62
CCR9P51686 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCR9P51686 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CCR9P51686 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCR9P51686 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCR9P51686 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.93■□□□□ 0.62
CCR9P51686 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCR9P51686 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.93■□□□□ 0.62
CCR9P51686 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCR9P51686 AC241377.3-202ENST00000626088 1088 ntBASIC18.93■□□□□ 0.62
CCR9P51686 AC241585.3-202ENST00000628937 1088 ntBASIC18.93■□□□□ 0.62
CCR9P51686 AC245100.8-202ENST00000629247 1058 ntBASIC18.93■□□□□ 0.62
CCR9P51686 AL031602.1-201ENST00000633169 911 ntBASIC18.93■□□□□ 0.62
CCR9P51686 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCR9P51686 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCR9P51686 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCR9P51686 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCR9P51686 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms