Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF144AP50876 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RNF144AP50876 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF144AP50876 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF144AP50876 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF144AP50876 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RNF144AP50876 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RNF144AP50876 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF144AP50876 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF144AP50876 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.04■□□□□ 0.8
RNF144AP50876 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF144AP50876 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF144AP50876 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF144AP50876 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF144AP50876 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF144AP50876 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF144AP50876 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF144AP50876 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF144AP50876 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RNF144AP50876 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF144AP50876 OR2I1P-207ENST00000453522 948 ntBASIC20.03■□□□□ 0.8
RNF144AP50876 PBX2P1-201ENST00000493219 1291 ntBASIC20.03■□□□□ 0.8
RNF144AP50876 AC011298.3-201ENST00000615796 283 ntBASIC20.03■□□□□ 0.8
RNF144AP50876 AL031602.1-201ENST00000633169 911 ntBASIC20.03■□□□□ 0.8
RNF144AP50876 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF144AP50876 AC092053.2-201ENST00000640557 1818 ntBASIC20.03■□□□□ 0.8
RNF144AP50876 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF144AP50876 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF144AP50876 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF144AP50876 PKD1P6-201ENST00000343738 4769 ntBASIC20.03■□□□□ 0.8
RNF144AP50876 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RNF144AP50876 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF144AP50876 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF144AP50876 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF144AP50876 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RNF144AP50876 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF144AP50876 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF144AP50876 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF144AP50876 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF144AP50876 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF144AP50876 AC110285.6-201ENST00000617652 491 ntBASIC20.02■□□□□ 0.8
RNF144AP50876 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RNF144AP50876 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RNF144AP50876 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF144AP50876 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.02■□□□□ 0.79
RNF144AP50876 AC135279.3-201ENST00000610945 1311 ntBASIC20.02■□□□□ 0.79
RNF144AP50876 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF144AP50876 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF144AP50876 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF144AP50876 AL138724.1-201ENST00000606771 1088 ntBASIC20.01■□□□□ 0.79
RNF144AP50876 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF144AP50876 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RNF144AP50876 FBXW4P1-201ENST00000426721 2239 ntBASIC20■□□□□ 0.79
RNF144AP50876 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF144AP50876 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20■□□□□ 0.79
RNF144AP50876 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RNF144AP50876 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20■□□□□ 0.79
RNF144AP50876 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF144AP50876 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF144AP50876 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF144AP50876 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF144AP50876 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF144AP50876 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF144AP50876 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20■□□□□ 0.79
RNF144AP50876 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20■□□□□ 0.79
RNF144AP50876 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20■□□□□ 0.79
RNF144AP50876 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF144AP50876 SF1-220ENST00000626028 704 ntTSL 2 BASIC20■□□□□ 0.79
RNF144AP50876 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RNF144AP50876 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF144AP50876 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF144AP50876 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF144AP50876 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RNF144AP50876 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF144AP50876 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF144AP50876 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RNF144AP50876 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RNF144AP50876 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF144AP50876 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF144AP50876 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RNF144AP50876 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.99■□□□□ 0.79
RNF144AP50876 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF144AP50876 AC008764.7-201ENST00000593779 1081 ntBASIC19.99■□□□□ 0.79
RNF144AP50876 CA15P2-201ENST00000611168 834 ntBASIC19.99■□□□□ 0.79
RNF144AP50876 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF144AP50876 C11orf96-202ENST00000528572 1834 ntBASIC19.99■□□□□ 0.79
RNF144AP50876 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF144AP50876 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RNF144AP50876 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF144AP50876 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF144AP50876 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF144AP50876 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF144AP50876 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF144AP50876 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF144AP50876 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
RNF144AP50876 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF144AP50876 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF144AP50876 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF144AP50876 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF144AP50876 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms