Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.64□□□□□ -0.23
UBE2AP49459 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.64□□□□□ -0.23
UBE2AP49459 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2AP49459 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
UBE2AP49459 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2AP49459 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UBE2AP49459 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
UBE2AP49459 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UBE2AP49459 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
UBE2AP49459 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.63□□□□□ -0.23
UBE2AP49459 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UBE2AP49459 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2AP49459 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2AP49459 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2AP49459 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
UBE2AP49459 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
UBE2AP49459 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.63□□□□□ -0.23
UBE2AP49459 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC13.63□□□□□ -0.23
UBE2AP49459 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2AP49459 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
UBE2AP49459 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
UBE2AP49459 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UBE2AP49459 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2AP49459 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBE2AP49459 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC13.62□□□□□ -0.23
UBE2AP49459 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.62□□□□□ -0.23
UBE2AP49459 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 C17orf82-201ENST00000623772 1530 ntBASIC13.62□□□□□ -0.23
UBE2AP49459 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC13.62□□□□□ -0.23
UBE2AP49459 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBE2AP49459 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBE2AP49459 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2AP49459 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2AP49459 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 LINC00526-201ENST00000581067 1875 ntBASIC13.61□□□□□ -0.23
UBE2AP49459 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 AC004687.1-201ENST00000579003 1625 ntBASIC13.61□□□□□ -0.23
UBE2AP49459 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2AP49459 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
UBE2AP49459 GUSBP5-201ENST00000418136 578 ntBASIC13.61□□□□□ -0.23
UBE2AP49459 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC13.61□□□□□ -0.23
UBE2AP49459 AC241377.3-202ENST00000626088 1088 ntBASIC13.61□□□□□ -0.23
UBE2AP49459 AC241585.3-202ENST00000628937 1088 ntBASIC13.61□□□□□ -0.23
UBE2AP49459 AC245100.8-202ENST00000629247 1058 ntBASIC13.61□□□□□ -0.23
UBE2AP49459 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UBE2AP49459 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UBE2AP49459 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2AP49459 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
UBE2AP49459 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2AP49459 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 AC127496.7-201ENST00000625110 1798 ntBASIC13.6□□□□□ -0.23
UBE2AP49459 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2AP49459 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
UBE2AP49459 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2AP49459 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 AC242852.2-201ENST00000615738 1807 ntBASIC13.6□□□□□ -0.23
UBE2AP49459 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC13.6□□□□□ -0.23
UBE2AP49459 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UBE2AP49459 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2AP49459 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC13.6□□□□□ -0.23
UBE2AP49459 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms