Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeast

Predictions only

Length 763 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	P42843	COS12	YGL263W	1143 nt		4.32	□□□□□ -1.72
SKP2	P42843	COS8	YHL048W	1146 nt		4.32	□□□□□ -1.72
SKP2	P42843	YLR156W	YLR156W	345 nt		4.32	□□□□□ -1.72
SKP2	P42843	YLR159W	YLR159W	345 nt		4.32	□□□□□ -1.72
SKP2	P42843	YLR161W	YLR161W	345 nt		4.32	□□□□□ -1.72
SKP2	P42843	IBD2	YNL164C	1056 nt		4.32	□□□□□ -1.72
SKP2	P42843	TMC1	YOR052C	453 nt		4.32	□□□□□ -1.72
SKP2	P42843	HAP4	YKL109W	1665 nt		4.32	□□□□□ -1.72
SKP2	P42843	SMP3	YOR149C	1551 nt		4.31	□□□□□ -1.72
SKP2	P42843	FKH2	YNL068C	2589 nt		4.31	□□□□□ -1.72
SKP2	P42843	RPP1A	YDL081C	321 nt		4.31	□□□□□ -1.72
SKP2	P42843	SPT15	YER148W	723 nt		4.31	□□□□□ -1.72
SKP2	P42843	SPI1	YER150W	447 nt		4.31	□□□□□ -1.72
SKP2	P42843	YGL132W	YGL132W	336 nt		4.31	□□□□□ -1.72
SKP2	P42843	YLR339C	YLR339C	552 nt		4.31	□□□□□ -1.72
SKP2	P42843	SUI1	YNL244C	327 nt		4.31	□□□□□ -1.72
SKP2	P42843	SYC1	YOR179C	567 nt		4.31	□□□□□ -1.72
SKP2	P42843	SUA7	YPR086W	1038 nt		4.31	□□□□□ -1.72
SKP2	P42843	YBR255C-A	YBR255C-A	363 nt		4.31	□□□□□ -1.72
SKP2	P42843	FAR8	YMR029C	1572 nt		4.31	□□□□□ -1.72
SKP2	P42843	CEX1	YOR112W	2286 nt		4.3	□□□□□ -1.72
SKP2	P42843	MCP2	YLR253W	1710 nt		4.3	□□□□□ -1.72
SKP2	P42843	RPL35B	YDL136W	363 nt		4.3	□□□□□ -1.72
SKP2	P42843	TFB3	YDR460W	966 nt		4.3	□□□□□ -1.72
SKP2	P42843	RPL24A	YGL031C	468 nt		4.3	□□□□□ -1.72
SKP2	P42843	YHL044W	YHL044W	708 nt		4.3	□□□□□ -1.72
SKP2	P42843	YIR023C-A	YIR023C-A	324 nt		4.3	□□□□□ -1.72
SKP2	P42843	GPN3	YLR243W	819 nt		4.3	□□□□□ -1.72
SKP2	P42843	CSI1	YMR025W	888 nt		4.3	□□□□□ -1.72
SKP2	P42843	ERG29	YMR134W	714 nt		4.3	□□□□□ -1.72
SKP2	P42843	END3	YNL084C	1050 nt		4.3	□□□□□ -1.72
SKP2	P42843	YPT53	YNL093W	663 nt		4.3	□□□□□ -1.72
SKP2	P42843	COS1	YNL336W	1146 nt		4.3	□□□□□ -1.72
SKP2	P42843	snR44	snR44	211 nt		4.3	□□□□□ -1.72
SKP2	P42843	HPR1	YDR138W	2259 nt		4.3	□□□□□ -1.72
SKP2	P42843	CLG1	YGL215W	1359 nt		4.29	□□□□□ -1.72
SKP2	P42843	CTR86	YCR054C	1692 nt		4.29	□□□□□ -1.72
SKP2	P42843	YCL075W	YCL075W	441 nt		4.29	□□□□□ -1.72
SKP2	P42843	RPC11	YDR045C	333 nt		4.29	□□□□□ -1.72
SKP2	P42843	HSP42	YDR171W	1128 nt		4.29	□□□□□ -1.72
SKP2	P42843	YGL006W-A	YGL006W-A	111 nt		4.29	□□□□□ -1.72
SKP2	P42843	PSF2	YJL072C	642 nt		4.29	□□□□□ -1.72
SKP2	P42843	MNN11	YJL183W	1269 nt		4.29	□□□□□ -1.72
SKP2	P42843	FIP1	YJR093C	984 nt		4.29	□□□□□ -1.72
SKP2	P42843	IRC25	YLR021W	540 nt		4.29	□□□□□ -1.72
SKP2	P42843	IMP1	YMR150C	573 nt		4.29	□□□□□ -1.72
SKP2	P42843	RCE1	YMR274C	948 nt		4.29	□□□□□ -1.72
SKP2	P42843	YNL320W	YNL320W	855 nt		4.29	□□□□□ -1.72
SKP2	P42843	YGK3	YOL128C	1128 nt		4.29	□□□□□ -1.72
SKP2	P42843	YBR116C	YBR116C	528 nt		4.29	□□□□□ -1.72
SKP2	P42843	YCL021W-A	YCL021W-A	378 nt		4.29	□□□□□ -1.72
SKP2	P42843	YSH1	YLR277C	2340 nt		4.29	□□□□□ -1.72
SKP2	P42843	ACA1	YER045C	1470 nt		4.29	□□□□□ -1.72
SKP2	P42843	USA1	YML029W	2517 nt		4.29	□□□□□ -1.72
SKP2	P42843	YDR090C	YDR090C	933 nt		4.28	□□□□□ -1.72
SKP2	P42843	SRB7	YDR308C	423 nt		4.28	□□□□□ -1.72
SKP2	P42843	RTA1	YGR213C	954 nt		4.28	□□□□□ -1.72
SKP2	P42843	ECM9	YKR004C	1134 nt		4.28	□□□□□ -1.72
SKP2	P42843	TVP38	YKR088C	1014 nt		4.28	□□□□□ -1.72
SKP2	P42843	PAM18	YLR008C	507 nt		4.28	□□□□□ -1.72
SKP2	P42843	YPR027C	YPR027C	834 nt		4.28	□□□□□ -1.72
SKP2	P42843	PMS1	YNL082W	2622 nt		4.28	□□□□□ -1.72
SKP2	P42843	LRG1	YDL240W	3054 nt		4.27	□□□□□ -1.73
SKP2	P42843	NUF2	YOL069W	1356 nt		4.27	□□□□□ -1.73
SKP2	P42843	NUP2	YLR335W	2163 nt		4.27	□□□□□ -1.73
SKP2	P42843	RAD54	YGL163C	2697 nt		4.27	□□□□□ -1.73
SKP2	P42843	TCB3	YML072C	4638 nt		4.27	□□□□□ -1.73
SKP2	P42843	GLO3	YER122C	1482 nt		4.27	□□□□□ -1.73
SKP2	P42843	tC(GCA)B	tC(GCA)B	72 nt		4.27	□□□□□ -1.73
SKP2	P42843	tC(GCA)G	tC(GCA)G	72 nt		4.27	□□□□□ -1.73
SKP2	P42843	tC(GCA)P1	tC(GCA)P1	72 nt		4.27	□□□□□ -1.73
SKP2	P42843	tC(GCA)P2	tC(GCA)P2	72 nt		4.27	□□□□□ -1.73
SKP2	P42843	YGL188C	YGL188C	174 nt		4.27	□□□□□ -1.73
SKP2	P42843	PFS1	YHR185C	714 nt		4.27	□□□□□ -1.73
SKP2	P42843	GPP1	YIL053W	753 nt		4.27	□□□□□ -1.73
SKP2	P42843	MTR2	YKL186C	555 nt		4.27	□□□□□ -1.73
SKP2	P42843	ILV5	YLR355C	1188 nt		4.27	□□□□□ -1.73
SKP2	P42843	MRPL17	YNL252C	846 nt		4.27	□□□□□ -1.73
SKP2	P42843	YAR1	YPL239W	603 nt		4.27	□□□□□ -1.73
SKP2	P42843	DHR2	YKL078W	2208 nt		4.27	□□□□□ -1.73
SKP2	P42843	GCD1	YOR260W	1737 nt		4.26	□□□□□ -1.73
SKP2	P42843	ROK1	YGL171W	1695 nt		4.26	□□□□□ -1.73
SKP2	P42843	YDR230W	YDR230W	348 nt		4.26	□□□□□ -1.73
SKP2	P42843	YFL012W	YFL012W	447 nt		4.26	□□□□□ -1.73
SKP2	P42843	RPL22B	YFL034C-A	369 nt		4.26	□□□□□ -1.73
SKP2	P42843	YFL051C	YFL051C	483 nt		4.26	□□□□□ -1.73
SKP2	P42843	YFR057W	YFR057W	456 nt		4.26	□□□□□ -1.73
SKP2	P42843	YGL117W	YGL117W	798 nt		4.26	□□□□□ -1.73
SKP2	P42843	PIR3	YKL163W	978 nt		4.26	□□□□□ -1.73
SKP2	P42843	FAR3	YMR052W	615 nt		4.26	□□□□□ -1.73
SKP2	P42843	MDM12	YOL009C	816 nt		4.26	□□□□□ -1.73
SKP2	P42843	YOL106W	YOL106W	354 nt		4.26	□□□□□ -1.73
SKP2	P42843	PFK27	YOL136C	1194 nt		4.26	□□□□□ -1.73
SKP2	P42843	YOR263C	YOR263C	408 nt		4.26	□□□□□ -1.73
SKP2	P42843	GRX5	YPL059W	453 nt		4.26	□□□□□ -1.73
SKP2	P42843	TRF5	YNL299W	1929 nt		4.26	□□□□□ -1.73
SKP2	P42843	PLM2	YDR501W	1566 nt		4.26	□□□□□ -1.73
SKP2	P42843	CET1	YPL228W	1650 nt		4.26	□□□□□ -1.73
SKP2	P42843	YHR202W	YHR202W	1809 nt		4.25	□□□□□ -1.73
SKP2	P42843	COM2	YER130C	1332 nt		4.25	□□□□□ -1.73

Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms