Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.7■□□□□ 0.42
SNCAP37840 KRT8P33-201ENST00000508125 1423 ntBASIC17.7■□□□□ 0.42
SNCAP37840 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNCAP37840 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.7■□□□□ 0.42
SNCAP37840 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.7■□□□□ 0.42
SNCAP37840 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNCAP37840 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNCAP37840 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNCAP37840 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.7■□□□□ 0.42
SNCAP37840 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNCAP37840 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SNCAP37840 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNCAP37840 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.69■□□□□ 0.42
SNCAP37840 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.69■□□□□ 0.42
SNCAP37840 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNCAP37840 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.69■□□□□ 0.42
SNCAP37840 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNCAP37840 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNCAP37840 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNCAP37840 SNX5-217ENST00000606557 1087 ntBASIC17.69■□□□□ 0.42
SNCAP37840 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNCAP37840 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNCAP37840 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNCAP37840 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNCAP37840 AC144652.1-201ENST00000609974 1624 ntBASIC17.69■□□□□ 0.42
SNCAP37840 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNCAP37840 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNCAP37840 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNCAP37840 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNCAP37840 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNCAP37840 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNCAP37840 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.68■□□□□ 0.42
SNCAP37840 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.68■□□□□ 0.42
SNCAP37840 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.68■□□□□ 0.42
SNCAP37840 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SNCAP37840 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SNCAP37840 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNCAP37840 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNCAP37840 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNCAP37840 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNCAP37840 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNCAP37840 LINC01521-201ENST00000504184 1943 ntBASIC17.67■□□□□ 0.42
SNCAP37840 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNCAP37840 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SNCAP37840 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.67■□□□□ 0.42
SNCAP37840 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.67■□□□□ 0.42
SNCAP37840 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.67■□□□□ 0.42
SNCAP37840 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNCAP37840 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNCAP37840 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNCAP37840 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNCAP37840 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNCAP37840 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNCAP37840 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SNCAP37840 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNCAP37840 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SNCAP37840 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.66■□□□□ 0.42
SNCAP37840 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.66■□□□□ 0.42
SNCAP37840 AC103724.3-201ENST00000564481 992 ntBASIC17.66■□□□□ 0.42
SNCAP37840 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.66■□□□□ 0.42
SNCAP37840 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNCAP37840 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.66■□□□□ 0.42
SNCAP37840 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SNCAP37840 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SNCAP37840 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNCAP37840 AC005703.6-201ENST00000623265 1329 ntBASIC17.66■□□□□ 0.42
SNCAP37840 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNCAP37840 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNCAP37840 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SNCAP37840 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNCAP37840 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNCAP37840 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNCAP37840 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.65■□□□□ 0.42
SNCAP37840 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNCAP37840 AC137630.3-201ENST00000607245 391 ntBASIC17.65■□□□□ 0.42
SNCAP37840 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNCAP37840 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
SNCAP37840 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SNCAP37840 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNCAP37840 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.65■□□□□ 0.42
SNCAP37840 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SNCAP37840 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
SNCAP37840 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNCAP37840 AC007952.6-201ENST00000573168 2673 ntBASIC17.65■□□□□ 0.42
SNCAP37840 AC003957.1-201ENST00000625108 2673 ntBASIC17.65■□□□□ 0.42
SNCAP37840 AC010542.4-201ENST00000563151 1910 ntBASIC17.64■□□□□ 0.42
SNCAP37840 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNCAP37840 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNCAP37840 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SNCAP37840 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.64■□□□□ 0.41
SNCAP37840 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SNCAP37840 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNCAP37840 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
SNCAP37840 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNCAP37840 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.64■□□□□ 0.41
SNCAP37840 AC103834.1-201ENST00000520383 144 ntBASIC17.64■□□□□ 0.41
SNCAP37840 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SNCAP37840 AL031848.2-201ENST00000607670 837 ntBASIC17.64■□□□□ 0.41
SNCAP37840 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.64■□□□□ 0.41
SNCAP37840 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms