Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
PCK1P35558 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCK1P35558 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCK1P35558 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCK1P35558 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.69■■□□□ 1.22
PCK1P35558 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
PCK1P35558 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCK1P35558 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCK1P35558 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCK1P35558 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCK1P35558 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCK1P35558 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCK1P35558 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCK1P35558 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCK1P35558 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.69■■□□□ 1.22
PCK1P35558 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
PCK1P35558 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.68■■□□□ 1.22
PCK1P35558 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.68■■□□□ 1.22
PCK1P35558 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.68■■□□□ 1.22
PCK1P35558 AC079089.2-201ENST00000531211 1277 ntBASIC22.68■■□□□ 1.22
PCK1P35558 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCK1P35558 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.68■■□□□ 1.22
PCK1P35558 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
PCK1P35558 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCK1P35558 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PCK1P35558 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCK1P35558 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCK1P35558 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCK1P35558 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCK1P35558 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCK1P35558 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.67■■□□□ 1.22
PCK1P35558 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.67■■□□□ 1.22
PCK1P35558 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCK1P35558 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCK1P35558 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCK1P35558 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.66■■□□□ 1.22
PCK1P35558 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCK1P35558 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCK1P35558 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.66■■□□□ 1.22
PCK1P35558 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.66■■□□□ 1.22
PCK1P35558 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCK1P35558 AC087239.1-201ENST00000622671 572 ntBASIC22.66■■□□□ 1.22
PCK1P35558 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCK1P35558 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCK1P35558 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PCK1P35558 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
PCK1P35558 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PCK1P35558 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCK1P35558 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCK1P35558 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.66■■□□□ 1.22
PCK1P35558 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.65■■□□□ 1.22
PCK1P35558 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.65■■□□□ 1.22
PCK1P35558 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCK1P35558 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCK1P35558 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCK1P35558 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCK1P35558 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PCK1P35558 UNC93B3-201ENST00000308076 687 ntBASIC22.65■■□□□ 1.22
PCK1P35558 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCK1P35558 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PCK1P35558 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.65■■□□□ 1.22
PCK1P35558 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCK1P35558 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.65■■□□□ 1.22
PCK1P35558 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.65■■□□□ 1.22
PCK1P35558 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCK1P35558 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.65■■□□□ 1.22
PCK1P35558 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.65■■□□□ 1.22
PCK1P35558 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PCK1P35558 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.65■■□□□ 1.22
PCK1P35558 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCK1P35558 AC008406.3-201ENST00000620001 1374 ntBASIC22.64■■□□□ 1.22
PCK1P35558 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCK1P35558 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCK1P35558 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
PCK1P35558 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCK1P35558 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.64■■□□□ 1.21
PCK1P35558 SLC47A1P1-202ENST00000449666 945 ntBASIC22.64■■□□□ 1.21
PCK1P35558 AC010141.3-201ENST00000456659 717 ntBASIC22.64■■□□□ 1.21
PCK1P35558 AP005435.1-201ENST00000529293 1178 ntBASIC22.64■■□□□ 1.21
PCK1P35558 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.64■■□□□ 1.21
PCK1P35558 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCK1P35558 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCK1P35558 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCK1P35558 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCK1P35558 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCK1P35558 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCK1P35558 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 265.8 ms