Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLCN1P35523 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC24.51■■□□□ 1.51
CLCN1P35523 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.5■■□□□ 1.51
CLCN1P35523 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLCN1P35523 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLCN1P35523 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
CLCN1P35523 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.5■■□□□ 1.51
CLCN1P35523 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.5■■□□□ 1.51
CLCN1P35523 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLCN1P35523 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLCN1P35523 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CLCN1P35523 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLCN1P35523 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.5■■□□□ 1.51
CLCN1P35523 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLCN1P35523 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLCN1P35523 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLCN1P35523 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.49■■□□□ 1.51
CLCN1P35523 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLCN1P35523 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLCN1P35523 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.49■■□□□ 1.51
CLCN1P35523 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.49■■□□□ 1.51
CLCN1P35523 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.49■■□□□ 1.51
CLCN1P35523 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.49■■□□□ 1.51
CLCN1P35523 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLCN1P35523 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLCN1P35523 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.48■■□□□ 1.51
CLCN1P35523 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CLCN1P35523 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CLCN1P35523 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CLCN1P35523 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.48■■□□□ 1.51
CLCN1P35523 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CLCN1P35523 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
CLCN1P35523 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
CLCN1P35523 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLCN1P35523 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLCN1P35523 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.47■■□□□ 1.51
CLCN1P35523 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.47■■□□□ 1.51
CLCN1P35523 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC24.47■■□□□ 1.51
CLCN1P35523 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLCN1P35523 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
CLCN1P35523 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLCN1P35523 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC24.47■■□□□ 1.51
CLCN1P35523 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLCN1P35523 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLCN1P35523 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC24.46■■□□□ 1.51
CLCN1P35523 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLCN1P35523 AC087289.5-201ENST00000586076 3175 ntBASIC24.46■■□□□ 1.51
CLCN1P35523 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.46■■□□□ 1.51
CLCN1P35523 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLCN1P35523 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLCN1P35523 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CLCN1P35523 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.45■■□□□ 1.51
CLCN1P35523 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CLCN1P35523 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
CLCN1P35523 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.51
CLCN1P35523 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.45■■□□□ 1.51
CLCN1P35523 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
CLCN1P35523 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CLCN1P35523 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLCN1P35523 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.45■■□□□ 1.5
CLCN1P35523 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CLCN1P35523 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.45■■□□□ 1.5
CLCN1P35523 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CLCN1P35523 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC24.45■■□□□ 1.5
CLCN1P35523 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLCN1P35523 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.45■■□□□ 1.5
CLCN1P35523 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.44■■□□□ 1.5
CLCN1P35523 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLCN1P35523 AL031848.2-201ENST00000607670 837 ntBASIC24.44■■□□□ 1.5
CLCN1P35523 AC244015.2-201ENST00000616358 1861 ntBASIC24.44■■□□□ 1.5
CLCN1P35523 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLCN1P35523 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLCN1P35523 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLCN1P35523 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CLCN1P35523 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.44■■□□□ 1.5
CLCN1P35523 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CLCN1P35523 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLCN1P35523 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.43■■□□□ 1.5
CLCN1P35523 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLCN1P35523 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.43■■□□□ 1.5
CLCN1P35523 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLCN1P35523 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLCN1P35523 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLCN1P35523 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.43■■□□□ 1.5
CLCN1P35523 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
CLCN1P35523 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
CLCN1P35523 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.43■■□□□ 1.5
CLCN1P35523 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
CLCN1P35523 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.43■■□□□ 1.5
CLCN1P35523 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.43■■□□□ 1.5
CLCN1P35523 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLCN1P35523 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CLCN1P35523 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC24.42■■□□□ 1.5
CLCN1P35523 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.42■■□□□ 1.5
CLCN1P35523 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.42■■□□□ 1.5
CLCN1P35523 AC137630.3-201ENST00000607245 391 ntBASIC24.42■■□□□ 1.5
CLCN1P35523 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CLCN1P35523 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLCN1P35523 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLCN1P35523 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms