Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CKS2P33552 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CKS2P33552 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CKS2P33552 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.86■□□□□ 0.13
CKS2P33552 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.86■□□□□ 0.13
CKS2P33552 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS2P33552 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC15.86■□□□□ 0.13
CKS2P33552 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CKS2P33552 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS2P33552 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.86■□□□□ 0.13
CKS2P33552 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS2P33552 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS2P33552 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CKS2P33552 AC144652.1-201ENST00000609974 1624 ntBASIC15.86■□□□□ 0.13
CKS2P33552 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS2P33552 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.86■□□□□ 0.13
CKS2P33552 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CKS2P33552 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CKS2P33552 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CKS2P33552 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CKS2P33552 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CKS2P33552 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CKS2P33552 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CKS2P33552 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.85■□□□□ 0.13
CKS2P33552 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CKS2P33552 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CKS2P33552 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CKS2P33552 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CKS2P33552 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CKS2P33552 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CKS2P33552 LINC01960-201ENST00000563759 1884 ntBASIC15.84■□□□□ 0.13
CKS2P33552 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.84■□□□□ 0.13
CKS2P33552 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKS2P33552 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKS2P33552 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKS2P33552 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CKS2P33552 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CKS2P33552 SRP68-213ENST00000629930 165 ntTSL 5 BASIC15.84■□□□□ 0.13
CKS2P33552 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CKS2P33552 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.84■□□□□ 0.13
CKS2P33552 Z98882.1-201ENST00000622160 2253 ntBASIC15.84■□□□□ 0.13
CKS2P33552 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CKS2P33552 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CKS2P33552 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKS2P33552 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.84■□□□□ 0.13
CKS2P33552 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CKS2P33552 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CKS2P33552 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKS2P33552 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
CKS2P33552 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CKS2P33552 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CKS2P33552 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKS2P33552 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CKS2P33552 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.83■□□□□ 0.12
CKS2P33552 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CKS2P33552 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.83■□□□□ 0.12
CKS2P33552 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.83■□□□□ 0.12
CKS2P33552 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKS2P33552 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CKS2P33552 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CKS2P33552 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKS2P33552 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKS2P33552 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKS2P33552 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKS2P33552 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
CKS2P33552 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CKS2P33552 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
CKS2P33552 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKS2P33552 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CKS2P33552 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.82■□□□□ 0.12
CKS2P33552 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS2P33552 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS2P33552 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS2P33552 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS2P33552 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CKS2P33552 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS2P33552 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC15.82■□□□□ 0.12
CKS2P33552 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.82■□□□□ 0.12
CKS2P33552 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS2P33552 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS2P33552 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.82■□□□□ 0.12
CKS2P33552 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.82■□□□□ 0.12
CKS2P33552 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.82■□□□□ 0.12
CKS2P33552 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.82■□□□□ 0.12
CKS2P33552 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.82■□□□□ 0.12
CKS2P33552 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.82■□□□□ 0.12
CKS2P33552 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.82■□□□□ 0.12
CKS2P33552 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS2P33552 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS2P33552 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS2P33552 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CKS2P33552 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS2P33552 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKS2P33552 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.81■□□□□ 0.12
CKS2P33552 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CKS2P33552 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CKS2P33552 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CKS2P33552 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CKS2P33552 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CKS2P33552 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms