Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.73■■□□□ 1.55
CTGFP29279 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CTGFP29279 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CTGFP29279 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
CTGFP29279 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.73■■□□□ 1.55
CTGFP29279 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.73■■□□□ 1.55
CTGFP29279 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC24.73■■□□□ 1.55
CTGFP29279 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC24.73■■□□□ 1.55
CTGFP29279 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.73■■□□□ 1.55
CTGFP29279 RARRES2P4-201ENST00000514074 484 ntBASIC24.73■■□□□ 1.55
CTGFP29279 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.73■■□□□ 1.55
CTGFP29279 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.73■■□□□ 1.55
CTGFP29279 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CTGFP29279 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CTGFP29279 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
CTGFP29279 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CTGFP29279 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
CTGFP29279 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.72■■□□□ 1.55
CTGFP29279 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CTGFP29279 AC093787.1-201ENST00000450396 207 ntBASIC24.72■■□□□ 1.55
CTGFP29279 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.72■■□□□ 1.55
CTGFP29279 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.72■■□□□ 1.55
CTGFP29279 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
CTGFP29279 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CTGFP29279 MKRN4P-201ENST00000444706 1521 ntBASIC24.71■■□□□ 1.55
CTGFP29279 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CTGFP29279 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.71■■□□□ 1.55
CTGFP29279 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.71■■□□□ 1.55
CTGFP29279 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.71■■□□□ 1.55
CTGFP29279 AL596275.1-201ENST00000423464 877 ntBASIC24.71■■□□□ 1.55
CTGFP29279 GCSHP5-201ENST00000443090 522 ntBASIC24.71■■□□□ 1.55
CTGFP29279 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.71■■□□□ 1.55
CTGFP29279 AC138907.5-202ENST00000569484 235 ntBASIC24.71■■□□□ 1.55
CTGFP29279 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CTGFP29279 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.71■■□□□ 1.55
CTGFP29279 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CTGFP29279 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
CTGFP29279 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
CTGFP29279 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CTGFP29279 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CTGFP29279 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.7■■□□□ 1.54
CTGFP29279 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CTGFP29279 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CTGFP29279 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.7■■□□□ 1.54
CTGFP29279 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC24.7■■□□□ 1.54
CTGFP29279 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CTGFP29279 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CTGFP29279 AC083880.1-201ENST00000608266 535 ntBASIC24.7■■□□□ 1.54
CTGFP29279 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.7■■□□□ 1.54
CTGFP29279 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.7■■□□□ 1.54
CTGFP29279 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
CTGFP29279 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CTGFP29279 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
CTGFP29279 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
CTGFP29279 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.69■■□□□ 1.54
CTGFP29279 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CTGFP29279 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.69■■□□□ 1.54
CTGFP29279 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.69■■□□□ 1.54
CTGFP29279 TERF1P5-201ENST00000477545 1207 ntBASIC24.69■■□□□ 1.54
CTGFP29279 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.69■■□□□ 1.54
CTGFP29279 KRT18P20-201ENST00000548986 1279 ntBASIC24.69■■□□□ 1.54
CTGFP29279 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.69■■□□□ 1.54
CTGFP29279 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.69■■□□□ 1.54
CTGFP29279 AC142381.3-201ENST00000568208 1670 ntBASIC24.69■■□□□ 1.54
CTGFP29279 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTGFP29279 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CTGFP29279 ADM-205ENST00000528544 586 ntTSL 2 BASIC24.68■■□□□ 1.54
CTGFP29279 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.68■■□□□ 1.54
CTGFP29279 AC013268.1-206ENST00000638368 961 ntBASIC24.68■■□□□ 1.54
CTGFP29279 AC112229.1-201ENST00000639295 961 ntBASIC24.68■■□□□ 1.54
CTGFP29279 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTGFP29279 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CTGFP29279 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CTGFP29279 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTGFP29279 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CTGFP29279 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.67■■□□□ 1.54
CTGFP29279 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
CTGFP29279 AC092118.2-201ENST00000613495 667 ntBASIC24.67■■□□□ 1.54
CTGFP29279 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
CTGFP29279 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CTGFP29279 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.66■■□□□ 1.54
CTGFP29279 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CTGFP29279 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC24.66■■□□□ 1.54
CTGFP29279 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CTGFP29279 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.66■■□□□ 1.54
CTGFP29279 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.65■■□□□ 1.54
CTGFP29279 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.65■■□□□ 1.54
CTGFP29279 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.65■■□□□ 1.54
CTGFP29279 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
CTGFP29279 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTGFP29279 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC24.65■■□□□ 1.54
CTGFP29279 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.65■■□□□ 1.54
CTGFP29279 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CTGFP29279 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CTGFP29279 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CTGFP29279 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.65■■□□□ 1.54
CTGFP29279 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.65■■□□□ 1.54
CTGFP29279 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CTGFP29279 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTGFP29279 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms