Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APCP25054 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APCP25054 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
APCP25054 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.49■□□□□ 0.55
APCP25054 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.49■□□□□ 0.55
APCP25054 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APCP25054 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
APCP25054 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
APCP25054 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
APCP25054 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
APCP25054 AC091874.3-201ENST00000512672 1195 ntBASIC18.49■□□□□ 0.55
APCP25054 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.49■□□□□ 0.55
APCP25054 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.49■□□□□ 0.55
APCP25054 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APCP25054 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.49■□□□□ 0.55
APCP25054 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.49■□□□□ 0.55
APCP25054 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
APCP25054 AL512625.2-201ENST00000417533 625 ntBASIC18.49■□□□□ 0.55
APCP25054 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APCP25054 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APCP25054 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
APCP25054 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.48■□□□□ 0.55
APCP25054 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
APCP25054 UBE2SP1-201ENST00000450587 669 ntBASIC18.48■□□□□ 0.55
APCP25054 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
APCP25054 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
APCP25054 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
APCP25054 AC068587.7-201ENST00000641602 218 ntBASIC18.48■□□□□ 0.55
APCP25054 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
APCP25054 AC009237.3-201ENST00000393279 1427 ntBASIC18.47■□□□□ 0.55
APCP25054 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
APCP25054 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APCP25054 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APCP25054 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APCP25054 MIR718-201ENST00000390190 70 ntBASIC18.47■□□□□ 0.55
APCP25054 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.47■□□□□ 0.55
APCP25054 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APCP25054 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APCP25054 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.47■□□□□ 0.55
APCP25054 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
APCP25054 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.47■□□□□ 0.55
APCP25054 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APCP25054 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.47■□□□□ 0.55
APCP25054 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APCP25054 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.46■□□□□ 0.55
APCP25054 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
APCP25054 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
APCP25054 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
APCP25054 AC093787.1-201ENST00000450396 207 ntBASIC18.46■□□□□ 0.55
APCP25054 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.46■□□□□ 0.55
APCP25054 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.46■□□□□ 0.55
APCP25054 AC097658.1-201ENST00000475555 843 ntBASIC18.46■□□□□ 0.55
APCP25054 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.46■□□□□ 0.55
APCP25054 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
APCP25054 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
APCP25054 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APCP25054 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.46■□□□□ 0.55
APCP25054 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
APCP25054 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APCP25054 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
APCP25054 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APCP25054 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.45■□□□□ 0.54
APCP25054 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APCP25054 AC010141.2-201ENST00000452426 721 ntBASIC18.45■□□□□ 0.54
APCP25054 KRT18P21-201ENST00000515767 1272 ntBASIC18.45■□□□□ 0.54
APCP25054 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.45■□□□□ 0.54
APCP25054 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.45■□□□□ 0.54
APCP25054 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.45■□□□□ 0.54
APCP25054 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
APCP25054 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
APCP25054 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
APCP25054 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APCP25054 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APCP25054 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.45■□□□□ 0.54
APCP25054 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.45■□□□□ 0.54
APCP25054 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APCP25054 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APCP25054 AC010141.3-201ENST00000456659 717 ntBASIC18.45■□□□□ 0.54
APCP25054 Z99916.2-201ENST00000604037 246 ntBASIC18.45■□□□□ 0.54
APCP25054 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.45■□□□□ 0.54
APCP25054 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.45■□□□□ 0.54
APCP25054 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APCP25054 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APCP25054 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APCP25054 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.45■□□□□ 0.54
APCP25054 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.45■□□□□ 0.54
APCP25054 AP003097.1-201ENST00000530657 1135 ntBASIC18.45■□□□□ 0.54
APCP25054 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.45■□□□□ 0.54
APCP25054 AC008694.1-202ENST00000636953 945 ntBASIC18.45■□□□□ 0.54
APCP25054 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.44■□□□□ 0.54
APCP25054 DUSP8P5-201ENST00000422884 1815 ntBASIC18.44■□□□□ 0.54
APCP25054 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
APCP25054 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
APCP25054 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.44■□□□□ 0.54
APCP25054 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
APCP25054 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.44■□□□□ 0.54
APCP25054 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.44■□□□□ 0.54
APCP25054 AC016405.3-201ENST00000607710 860 ntBASIC18.44■□□□□ 0.54
APCP25054 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.44■□□□□ 0.54
APCP25054 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms