Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRPH2P23942 AC011298.3-201ENST00000615796 283 ntBASIC20.63■□□□□ 0.89
PRPH2P23942 AC136469.2-201ENST00000623944 1028 ntBASIC20.63■□□□□ 0.89
PRPH2P23942 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.63■□□□□ 0.89
PRPH2P23942 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRPH2P23942 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPH2P23942 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPH2P23942 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPH2P23942 SYT6-210ENST00000641643 1587 ntBASIC20.63■□□□□ 0.89
PRPH2P23942 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRPH2P23942 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PRPH2P23942 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRPH2P23942 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRPH2P23942 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.62■□□□□ 0.89
PRPH2P23942 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRPH2P23942 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRPH2P23942 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.62■□□□□ 0.89
PRPH2P23942 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.62■□□□□ 0.89
PRPH2P23942 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PRPH2P23942 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRPH2P23942 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRPH2P23942 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.62■□□□□ 0.89
PRPH2P23942 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.62■□□□□ 0.89
PRPH2P23942 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRPH2P23942 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRPH2P23942 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPH2P23942 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.61■□□□□ 0.89
PRPH2P23942 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRPH2P23942 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PRPH2P23942 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.61■□□□□ 0.89
PRPH2P23942 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.61■□□□□ 0.89
PRPH2P23942 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRPH2P23942 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.61■□□□□ 0.89
PRPH2P23942 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPH2P23942 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PRPH2P23942 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.6■□□□□ 0.89
PRPH2P23942 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPH2P23942 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPH2P23942 AC131281.2-201ENST00000520478 145 ntBASIC20.6■□□□□ 0.89
PRPH2P23942 AP005435.1-201ENST00000529293 1178 ntBASIC20.6■□□□□ 0.89
PRPH2P23942 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.6■□□□□ 0.89
PRPH2P23942 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRPH2P23942 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPH2P23942 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
PRPH2P23942 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PRPH2P23942 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.6■□□□□ 0.89
PRPH2P23942 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPH2P23942 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.59■□□□□ 0.89
PRPH2P23942 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPH2P23942 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPH2P23942 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPH2P23942 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPH2P23942 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PRPH2P23942 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.59■□□□□ 0.89
PRPH2P23942 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.59■□□□□ 0.89
PRPH2P23942 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.59■□□□□ 0.89
PRPH2P23942 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPH2P23942 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRPH2P23942 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.58■□□□□ 0.89
PRPH2P23942 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.58■□□□□ 0.89
PRPH2P23942 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
PRPH2P23942 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRPH2P23942 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.58■□□□□ 0.89
PRPH2P23942 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.58■□□□□ 0.89
PRPH2P23942 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PRPH2P23942 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRPH2P23942 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRPH2P23942 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.58■□□□□ 0.89
PRPH2P23942 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRPH2P23942 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRPH2P23942 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
PRPH2P23942 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
PRPH2P23942 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.58■□□□□ 0.88
PRPH2P23942 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.57■□□□□ 0.88
PRPH2P23942 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PRPH2P23942 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.57■□□□□ 0.88
PRPH2P23942 AC026471.6-201ENST00000622954 1905 ntBASIC20.57■□□□□ 0.88
PRPH2P23942 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRPH2P23942 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PRPH2P23942 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRPH2P23942 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRPH2P23942 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRPH2P23942 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
PRPH2P23942 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.57■□□□□ 0.88
PRPH2P23942 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRPH2P23942 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.57■□□□□ 0.88
PRPH2P23942 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PRPH2P23942 AL137060.1-201ENST00000618151 2648 ntBASIC20.57■□□□□ 0.88
PRPH2P23942 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
PRPH2P23942 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.57■□□□□ 0.88
PRPH2P23942 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.57■□□□□ 0.88
PRPH2P23942 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PRPH2P23942 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRPH2P23942 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.56■□□□□ 0.88
PRPH2P23942 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRPH2P23942 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PRPH2P23942 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRPH2P23942 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.56■□□□□ 0.88
PRPH2P23942 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.56■□□□□ 0.88
PRPH2P23942 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms