Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CCL1P22362 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.65■□□□□ 0.58
CCL1P22362 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL1P22362 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL1P22362 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL1P22362 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.64■□□□□ 0.58
CCL1P22362 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCL1P22362 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL1P22362 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CCL1P22362 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL1P22362 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL1P22362 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL1P22362 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL1P22362 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL1P22362 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL1P22362 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL1P22362 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCL1P22362 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL1P22362 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL1P22362 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL1P22362 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.63■□□□□ 0.57
CCL1P22362 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.63■□□□□ 0.57
CCL1P22362 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCL1P22362 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCL1P22362 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL1P22362 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCL1P22362 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL1P22362 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCL1P22362 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCL1P22362 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
CCL1P22362 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.63■□□□□ 0.57
CCL1P22362 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.63■□□□□ 0.57
CCL1P22362 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.63■□□□□ 0.57
CCL1P22362 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.63■□□□□ 0.57
CCL1P22362 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCL1P22362 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL1P22362 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL1P22362 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCL1P22362 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL1P22362 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL1P22362 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL1P22362 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL1P22362 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCL1P22362 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCL1P22362 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL1P22362 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.62■□□□□ 0.57
CCL1P22362 AL356441.2-201ENST00000443009 864 ntBASIC18.62■□□□□ 0.57
CCL1P22362 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.62■□□□□ 0.57
CCL1P22362 AC010525.1-201ENST00000585559 441 ntBASIC18.62■□□□□ 0.57
CCL1P22362 OXCT2P1-201ENST00000447263 1535 ntBASIC18.62■□□□□ 0.57
CCL1P22362 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL1P22362 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL1P22362 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.62■□□□□ 0.57
CCL1P22362 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL1P22362 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL1P22362 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.62■□□□□ 0.57
CCL1P22362 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL1P22362 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL1P22362 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL1P22362 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCL1P22362 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL1P22362 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCL1P22362 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.61■□□□□ 0.57
CCL1P22362 DUX4L19-201ENST00000557448 1267 ntBASIC18.61■□□□□ 0.57
CCL1P22362 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL1P22362 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL1P22362 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCL1P22362 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL1P22362 Z98882.1-201ENST00000622160 2253 ntBASIC18.61■□□□□ 0.57
CCL1P22362 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.61■□□□□ 0.57
CCL1P22362 AC026471.6-201ENST00000622954 1905 ntBASIC18.61■□□□□ 0.57
CCL1P22362 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL1P22362 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL1P22362 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL1P22362 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCL1P22362 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL1P22362 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.6■□□□□ 0.57
CCL1P22362 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL1P22362 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCL1P22362 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCL1P22362 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.6■□□□□ 0.57
CCL1P22362 SERBP1P1-201ENST00000396021 1160 ntBASIC18.6■□□□□ 0.57
CCL1P22362 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.6■□□□□ 0.57
CCL1P22362 AC136469.2-201ENST00000623944 1028 ntBASIC18.6■□□□□ 0.57
CCL1P22362 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCL1P22362 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCL1P22362 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CCL1P22362 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.6■□□□□ 0.57
CCL1P22362 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL1P22362 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCL1P22362 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL1P22362 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.59■□□□□ 0.57
CCL1P22362 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCL1P22362 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL1P22362 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CCL1P22362 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL1P22362 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.59■□□□□ 0.57
CCL1P22362 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.59■□□□□ 0.57
CCL1P22362 MIR4466-201ENST00000606121 54 ntBASIC18.59■□□□□ 0.57
CCL1P22362 AC011298.3-201ENST00000615796 283 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms