Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB3BP20337 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB3BP20337 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.89■□□□□ 0.62
RAB3BP20337 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.89■□□□□ 0.62
RAB3BP20337 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3BP20337 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3BP20337 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
RAB3BP20337 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3BP20337 DUX4L4-201ENST00000566884 1269 ntBASIC18.89■□□□□ 0.61
RAB3BP20337 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3BP20337 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB3BP20337 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RAB3BP20337 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB3BP20337 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3BP20337 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3BP20337 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RAB3BP20337 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RAB3BP20337 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3BP20337 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.88■□□□□ 0.61
RAB3BP20337 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3BP20337 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3BP20337 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RAB3BP20337 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3BP20337 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3BP20337 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RAB3BP20337 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB3BP20337 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RAB3BP20337 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RAB3BP20337 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RAB3BP20337 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RAB3BP20337 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3BP20337 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RAB3BP20337 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RAB3BP20337 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB3BP20337 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB3BP20337 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB3BP20337 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB3BP20337 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RAB3BP20337 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RAB3BP20337 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3BP20337 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3BP20337 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3BP20337 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3BP20337 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3BP20337 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3BP20337 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
RAB3BP20337 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3BP20337 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAB3BP20337 AC004687.1-201ENST00000579003 1625 ntBASIC18.86■□□□□ 0.61
RAB3BP20337 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAB3BP20337 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB3BP20337 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3BP20337 DUX4L18-201ENST00000553347 1267 ntBASIC18.86■□□□□ 0.61
RAB3BP20337 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB3BP20337 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3BP20337 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAB3BP20337 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3BP20337 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3BP20337 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3BP20337 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3BP20337 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3BP20337 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3BP20337 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3BP20337 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3BP20337 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB3BP20337 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3BP20337 AC092667.1-201ENST00000434301 2586 ntBASIC18.85■□□□□ 0.61
RAB3BP20337 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB3BP20337 BHLHE23-202ENST00000612929 1109 ntBASIC18.85■□□□□ 0.61
RAB3BP20337 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3BP20337 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAB3BP20337 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3BP20337 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RAB3BP20337 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB3BP20337 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3BP20337 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3BP20337 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RAB3BP20337 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3BP20337 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3BP20337 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAB3BP20337 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3BP20337 RARRES2P2-201ENST00000394842 485 ntBASIC18.84■□□□□ 0.61
RAB3BP20337 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB3BP20337 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB3BP20337 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RAB3BP20337 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms