Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
NCK1P16333 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.38■□□□□ 0.85
NCK1P16333 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCK1P16333 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCK1P16333 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCK1P16333 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NCK1P16333 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCK1P16333 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCK1P16333 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCK1P16333 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCK1P16333 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCK1P16333 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NCK1P16333 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NCK1P16333 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NCK1P16333 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NCK1P16333 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCK1P16333 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCK1P16333 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NCK1P16333 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCK1P16333 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.37■□□□□ 0.85
NCK1P16333 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCK1P16333 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCK1P16333 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.37■□□□□ 0.85
NCK1P16333 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.37■□□□□ 0.85
NCK1P16333 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NCK1P16333 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.37■□□□□ 0.85
NCK1P16333 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCK1P16333 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.37■□□□□ 0.85
NCK1P16333 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCK1P16333 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.37■□□□□ 0.85
NCK1P16333 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCK1P16333 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCK1P16333 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCK1P16333 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCK1P16333 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NCK1P16333 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.36■□□□□ 0.85
NCK1P16333 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCK1P16333 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCK1P16333 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.36■□□□□ 0.85
NCK1P16333 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NCK1P16333 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
NCK1P16333 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCK1P16333 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCK1P16333 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.36■□□□□ 0.85
NCK1P16333 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NCK1P16333 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCK1P16333 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NCK1P16333 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.35■□□□□ 0.85
NCK1P16333 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.35■□□□□ 0.85
NCK1P16333 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.35■□□□□ 0.85
NCK1P16333 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NCK1P16333 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.35■□□□□ 0.85
NCK1P16333 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.35■□□□□ 0.85
NCK1P16333 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.35■□□□□ 0.85
NCK1P16333 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NCK1P16333 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NCK1P16333 AC009102.2-201ENST00000606772 1639 ntBASIC20.35■□□□□ 0.85
NCK1P16333 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCK1P16333 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.34■□□□□ 0.85
NCK1P16333 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
NCK1P16333 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.34■□□□□ 0.85
NCK1P16333 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 AC026471.6-201ENST00000622954 1905 ntBASIC20.34■□□□□ 0.85
NCK1P16333 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.34■□□□□ 0.85
NCK1P16333 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.34■□□□□ 0.85
NCK1P16333 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.34■□□□□ 0.85
NCK1P16333 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NCK1P16333 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.34■□□□□ 0.85
NCK1P16333 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.34■□□□□ 0.85
NCK1P16333 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.34■□□□□ 0.85
NCK1P16333 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCK1P16333 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
NCK1P16333 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.34■□□□□ 0.85
NCK1P16333 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.34■□□□□ 0.85
NCK1P16333 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms