Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HLA-DOBP13765 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DOBP13765 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DOBP13765 AC010141.3-201ENST00000456659 717 ntBASIC19.38■□□□□ 0.69
HLA-DOBP13765 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.38■□□□□ 0.69
HLA-DOBP13765 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.38■□□□□ 0.69
HLA-DOBP13765 AC106739.1-201ENST00000617035 715 ntBASIC19.38■□□□□ 0.69
HLA-DOBP13765 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DOBP13765 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DOBP13765 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DOBP13765 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DOBP13765 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DOBP13765 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DOBP13765 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DOBP13765 BX842568.3-201ENST00000418104 571 ntBASIC19.37■□□□□ 0.69
HLA-DOBP13765 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.37■□□□□ 0.69
HLA-DOBP13765 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DOBP13765 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.37■□□□□ 0.69
HLA-DOBP13765 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.37■□□□□ 0.69
HLA-DOBP13765 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DOBP13765 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.37■□□□□ 0.69
HLA-DOBP13765 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DOBP13765 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DOBP13765 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HLA-DOBP13765 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HLA-DOBP13765 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DOBP13765 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOBP13765 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOBP13765 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HLA-DOBP13765 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HLA-DOBP13765 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOBP13765 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.36■□□□□ 0.69
HLA-DOBP13765 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOBP13765 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOBP13765 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.36■□□□□ 0.69
HLA-DOBP13765 AP005435.1-201ENST00000529293 1178 ntBASIC19.36■□□□□ 0.69
HLA-DOBP13765 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.36■□□□□ 0.69
HLA-DOBP13765 AC233992.3-201ENST00000607491 485 ntBASIC19.36■□□□□ 0.69
HLA-DOBP13765 AC087239.1-201ENST00000622671 572 ntBASIC19.36■□□□□ 0.69
HLA-DOBP13765 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOBP13765 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DOBP13765 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOBP13765 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOBP13765 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOBP13765 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HLA-DOBP13765 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
HLA-DOBP13765 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOBP13765 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOBP13765 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOBP13765 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOBP13765 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOBP13765 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-DOBP13765 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOBP13765 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOBP13765 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HLA-DOBP13765 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOBP13765 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOBP13765 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HLA-DOBP13765 AC008764.7-201ENST00000593779 1081 ntBASIC19.35■□□□□ 0.69
HLA-DOBP13765 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HLA-DOBP13765 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HLA-DOBP13765 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOBP13765 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOBP13765 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DOBP13765 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOBP13765 OXCT2P1-201ENST00000447263 1535 ntBASIC19.35■□□□□ 0.69
HLA-DOBP13765 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOBP13765 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DOBP13765 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.34■□□□□ 0.69
HLA-DOBP13765 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOBP13765 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOBP13765 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOBP13765 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DOBP13765 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
HLA-DOBP13765 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOBP13765 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOBP13765 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOBP13765 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
HLA-DOBP13765 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOBP13765 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DOBP13765 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.34■□□□□ 0.69
HLA-DOBP13765 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HLA-DOBP13765 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOBP13765 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOBP13765 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HLA-DOBP13765 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOBP13765 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DOBP13765 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOBP13765 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOBP13765 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DOBP13765 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DOBP13765 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
HLA-DOBP13765 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.33■□□□□ 0.69
HLA-DOBP13765 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DOBP13765 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DOBP13765 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HLA-DOBP13765 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DOBP13765 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DOBP13765 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DOBP13765 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms