Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCL4P13236 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCL4P13236 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.54■□□□□ 0.88
CCL4P13236 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.54■□□□□ 0.88
CCL4P13236 AC079089.2-201ENST00000531211 1277 ntBASIC20.54■□□□□ 0.88
CCL4P13236 DUX4L16-201ENST00000555130 1264 ntBASIC20.54■□□□□ 0.88
CCL4P13236 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.54■□□□□ 0.88
CCL4P13236 AP001160.3-201ENST00000601484 763 ntBASIC20.54■□□□□ 0.88
CCL4P13236 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CCL4P13236 AL050303.2-201ENST00000619798 666 ntBASIC20.54■□□□□ 0.88
CCL4P13236 AC055733.4-201ENST00000638462 1354 ntBASIC20.54■□□□□ 0.88
CCL4P13236 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
CCL4P13236 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCL4P13236 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCL4P13236 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCL4P13236 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCL4P13236 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCL4P13236 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCL4P13236 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCL4P13236 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.53■□□□□ 0.88
CCL4P13236 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCL4P13236 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.52■□□□□ 0.88
CCL4P13236 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.52■□□□□ 0.88
CCL4P13236 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCL4P13236 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCL4P13236 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCL4P13236 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.52■□□□□ 0.88
CCL4P13236 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCL4P13236 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCL4P13236 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCL4P13236 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.52■□□□□ 0.88
CCL4P13236 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCL4P13236 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCL4P13236 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.51■□□□□ 0.87
CCL4P13236 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCL4P13236 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCL4P13236 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCL4P13236 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.51■□□□□ 0.87
CCL4P13236 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.51■□□□□ 0.87
CCL4P13236 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.51■□□□□ 0.87
CCL4P13236 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.51■□□□□ 0.87
CCL4P13236 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.51■□□□□ 0.87
CCL4P13236 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCL4P13236 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.51■□□□□ 0.87
CCL4P13236 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCL4P13236 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.51■□□□□ 0.87
CCL4P13236 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.51■□□□□ 0.87
CCL4P13236 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCL4P13236 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCL4P13236 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCL4P13236 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL4P13236 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCL4P13236 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL4P13236 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCL4P13236 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL4P13236 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL4P13236 AC007322.1-201ENST00000426983 750 ntBASIC20.5■□□□□ 0.87
CCL4P13236 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.5■□□□□ 0.87
CCL4P13236 AC083906.2-201ENST00000511578 360 ntBASIC20.5■□□□□ 0.87
CCL4P13236 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.5■□□□□ 0.87
CCL4P13236 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL4P13236 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.5■□□□□ 0.87
CCL4P13236 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.5■□□□□ 0.87
CCL4P13236 AC231657.2-201ENST00000624556 255 ntBASIC20.5■□□□□ 0.87
CCL4P13236 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.5■□□□□ 0.87
CCL4P13236 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL4P13236 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.5■□□□□ 0.87
CCL4P13236 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL4P13236 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCL4P13236 AP004607.7-201ENST00000527152 1677 ntBASIC20.49■□□□□ 0.87
CCL4P13236 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.49■□□□□ 0.87
CCL4P13236 AL121832.2-201ENST00000610979 668 ntBASIC20.49■□□□□ 0.87
CCL4P13236 MYCNOS-205ENST00000641950 531 ntBASIC20.49■□□□□ 0.87
CCL4P13236 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCL4P13236 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCL4P13236 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCL4P13236 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCL4P13236 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCL4P13236 ABHD17AP1-201ENST00000358206 933 ntBASIC20.48■□□□□ 0.87
CCL4P13236 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CCL4P13236 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCL4P13236 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCL4P13236 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.48■□□□□ 0.87
CCL4P13236 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.48■□□□□ 0.87
CCL4P13236 AC005181.1-201ENST00000604782 1256 ntBASIC20.48■□□□□ 0.87
CCL4P13236 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.48■□□□□ 0.87
CCL4P13236 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCL4P13236 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCL4P13236 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCL4P13236 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.48■□□□□ 0.87
CCL4P13236 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
CCL4P13236 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
CCL4P13236 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCL4P13236 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL4P13236 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.47■□□□□ 0.87
CCL4P13236 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.47■□□□□ 0.87
CCL4P13236 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL4P13236 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.47■□□□□ 0.87
CCL4P13236 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL4P13236 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms