Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CD28P10747 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.89■□□□□ 0.29
CD28P10747 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.89■□□□□ 0.29
CD28P10747 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CD28P10747 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD28P10747 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD28P10747 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.89■□□□□ 0.29
CD28P10747 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD28P10747 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD28P10747 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD28P10747 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.88■□□□□ 0.29
CD28P10747 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD28P10747 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD28P10747 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CD28P10747 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CD28P10747 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD28P10747 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.88■□□□□ 0.29
CD28P10747 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.88■□□□□ 0.29
CD28P10747 AC073111.5-205ENST00000641717 521 ntBASIC16.88■□□□□ 0.29
CD28P10747 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CD28P10747 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CD28P10747 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD28P10747 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.88■□□□□ 0.29
CD28P10747 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD28P10747 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD28P10747 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CD28P10747 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD28P10747 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD28P10747 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD28P10747 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD28P10747 HLA-L-209ENST00000420110 1011 ntBASIC16.87■□□□□ 0.29
CD28P10747 CDCA4P2-201ENST00000441182 718 ntBASIC16.87■□□□□ 0.29
CD28P10747 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.87■□□□□ 0.29
CD28P10747 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.87■□□□□ 0.29
CD28P10747 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.87■□□□□ 0.29
CD28P10747 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.87■□□□□ 0.29
CD28P10747 BID-214ENST00000617586 542 ntTSL 5 BASIC16.87■□□□□ 0.29
CD28P10747 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.87■□□□□ 0.29
CD28P10747 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD28P10747 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CD28P10747 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CD28P10747 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD28P10747 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD28P10747 AC092068.2-201ENST00000590491 1708 ntBASIC16.87■□□□□ 0.29
CD28P10747 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD28P10747 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD28P10747 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.87■□□□□ 0.29
CD28P10747 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.87■□□□□ 0.29
CD28P10747 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.86■□□□□ 0.29
CD28P10747 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.86■□□□□ 0.29
CD28P10747 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CD28P10747 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.86■□□□□ 0.29
CD28P10747 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.86■□□□□ 0.29
CD28P10747 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.86■□□□□ 0.29
CD28P10747 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
CD28P10747 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CD28P10747 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.86■□□□□ 0.29
CD28P10747 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.86■□□□□ 0.29
CD28P10747 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.86■□□□□ 0.29
CD28P10747 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD28P10747 ESRRAP2-201ENST00000418437 1549 ntBASIC16.86■□□□□ 0.29
CD28P10747 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.85■□□□□ 0.29
CD28P10747 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.85■□□□□ 0.29
CD28P10747 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD28P10747 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CD28P10747 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.85■□□□□ 0.29
CD28P10747 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD28P10747 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CD28P10747 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD28P10747 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CD28P10747 AC005224.4-201ENST00000583262 1652 ntBASIC16.85■□□□□ 0.29
CD28P10747 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD28P10747 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD28P10747 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD28P10747 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD28P10747 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CD28P10747 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD28P10747 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.84■□□□□ 0.29
CD28P10747 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD28P10747 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.84■□□□□ 0.29
CD28P10747 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD28P10747 RAP2CP1-201ENST00000605103 478 ntBASIC16.84■□□□□ 0.29
CD28P10747 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.84■□□□□ 0.29
CD28P10747 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD28P10747 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD28P10747 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms