Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RBP1P09455 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RBP1P09455 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RBP1P09455 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.28■■□□□ 1
RBP1P09455 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.28■■□□□ 1
RBP1P09455 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RBP1P09455 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RBP1P09455 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RBP1P09455 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.27■■□□□ 1
RBP1P09455 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RBP1P09455 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RBP1P09455 GUSBP5-201ENST00000418136 578 ntBASIC21.27■■□□□ 1
RBP1P09455 AC092171.4-201ENST00000609130 632 ntBASIC21.27■■□□□ 1
RBP1P09455 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RBP1P09455 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.27■■□□□ 1
RBP1P09455 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RBP1P09455 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.27■■□□□ 1
RBP1P09455 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RBP1P09455 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.26■□□□□ 0.99
RBP1P09455 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RBP1P09455 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RBP1P09455 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.26■□□□□ 0.99
RBP1P09455 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.26■□□□□ 0.99
RBP1P09455 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.26■□□□□ 0.99
RBP1P09455 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.26■□□□□ 0.99
RBP1P09455 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.26■□□□□ 0.99
RBP1P09455 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.26■□□□□ 0.99
RBP1P09455 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RBP1P09455 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.26■□□□□ 0.99
RBP1P09455 MIR3181-201ENST00000578512 73 ntBASIC21.26■□□□□ 0.99
RBP1P09455 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RBP1P09455 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RBP1P09455 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RBP1P09455 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.26■□□□□ 0.99
RBP1P09455 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RBP1P09455 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.26■□□□□ 0.99
RBP1P09455 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.25■□□□□ 0.99
RBP1P09455 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RBP1P09455 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RBP1P09455 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RBP1P09455 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RBP1P09455 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.25■□□□□ 0.99
RBP1P09455 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RBP1P09455 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RBP1P09455 OR7E47P-201ENST00000546390 1422 ntBASIC21.25■□□□□ 0.99
RBP1P09455 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.25■□□□□ 0.99
RBP1P09455 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.25■□□□□ 0.99
RBP1P09455 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RBP1P09455 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.25■□□□□ 0.99
RBP1P09455 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RBP1P09455 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RBP1P09455 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.24■□□□□ 0.99
RBP1P09455 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RBP1P09455 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RBP1P09455 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RBP1P09455 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RBP1P09455 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RBP1P09455 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.24■□□□□ 0.99
RBP1P09455 SRD5A1P1-201ENST00000442297 786 ntBASIC21.24■□□□□ 0.99
RBP1P09455 OR2I1P-207ENST00000453522 948 ntBASIC21.24■□□□□ 0.99
RBP1P09455 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RBP1P09455 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RBP1P09455 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.24■□□□□ 0.99
RBP1P09455 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RBP1P09455 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RBP1P09455 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.24■□□□□ 0.99
RBP1P09455 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RBP1P09455 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.23■□□□□ 0.99
RBP1P09455 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RBP1P09455 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RBP1P09455 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.23■□□□□ 0.99
RBP1P09455 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RBP1P09455 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RBP1P09455 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RBP1P09455 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RBP1P09455 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.23■□□□□ 0.99
RBP1P09455 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RBP1P09455 AC087239.1-201ENST00000622671 572 ntBASIC21.23■□□□□ 0.99
RBP1P09455 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RBP1P09455 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RBP1P09455 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RBP1P09455 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RBP1P09455 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RBP1P09455 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBP1P09455 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBP1P09455 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBP1P09455 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.22■□□□□ 0.99
RBP1P09455 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBP1P09455 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBP1P09455 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBP1P09455 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RBP1P09455 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.22■□□□□ 0.99
RBP1P09455 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.22■□□□□ 0.99
RBP1P09455 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBP1P09455 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBP1P09455 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RBP1P09455 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBP1P09455 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBP1P09455 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBP1P09455 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms