Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN2P05204 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN2P05204 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN2P05204 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN2P05204 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN2P05204 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN2P05204 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN2P05204 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
HMGN2P05204 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.2■□□□□ 0.82
HMGN2P05204 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN2P05204 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HMGN2P05204 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN2P05204 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN2P05204 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.2■□□□□ 0.82
HMGN2P05204 AC008406.3-201ENST00000620001 1374 ntBASIC20.2■□□□□ 0.82
HMGN2P05204 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN2P05204 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN2P05204 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.19■□□□□ 0.82
HMGN2P05204 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGN2P05204 FAM99A-202ENST00000538190 1989 ntBASIC20.19■□□□□ 0.82
HMGN2P05204 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGN2P05204 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
HMGN2P05204 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN2P05204 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGN2P05204 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN2P05204 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN2P05204 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGN2P05204 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGN2P05204 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN2P05204 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
HMGN2P05204 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGN2P05204 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN2P05204 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN2P05204 OR7E47P-201ENST00000546390 1422 ntBASIC20.19■□□□□ 0.82
HMGN2P05204 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN2P05204 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN2P05204 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN2P05204 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
HMGN2P05204 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.18■□□□□ 0.82
HMGN2P05204 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN2P05204 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN2P05204 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGN2P05204 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN2P05204 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN2P05204 AC010542.4-201ENST00000563151 1910 ntBASIC20.17■□□□□ 0.82
HMGN2P05204 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN2P05204 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN2P05204 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN2P05204 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN2P05204 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN2P05204 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN2P05204 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HMGN2P05204 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGN2P05204 AP005435.1-201ENST00000529293 1178 ntBASIC20.17■□□□□ 0.82
HMGN2P05204 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGN2P05204 MIR4767-201ENST00000582827 78 ntBASIC20.17■□□□□ 0.82
HMGN2P05204 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN2P05204 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN2P05204 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGN2P05204 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HMGN2P05204 OXCT2P1-201ENST00000447263 1535 ntBASIC20.17■□□□□ 0.82
HMGN2P05204 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN2P05204 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN2P05204 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGN2P05204 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGN2P05204 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGN2P05204 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGN2P05204 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGN2P05204 AC024257.2-201ENST00000549699 147 ntBASIC20.16■□□□□ 0.82
HMGN2P05204 AL136162.1-201ENST00000607711 1078 ntBASIC20.16■□□□□ 0.82
HMGN2P05204 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN2P05204 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGN2P05204 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGN2P05204 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN2P05204 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN2P05204 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN2P05204 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN2P05204 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN2P05204 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
HMGN2P05204 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGN2P05204 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
HMGN2P05204 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN2P05204 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGN2P05204 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.15■□□□□ 0.82
HMGN2P05204 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HMGN2P05204 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGN2P05204 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN2P05204 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN2P05204 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HMGN2P05204 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
HMGN2P05204 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.14■□□□□ 0.81
HMGN2P05204 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
HMGN2P05204 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HMGN2P05204 AC135279.3-201ENST00000610945 1311 ntBASIC20.14■□□□□ 0.81
HMGN2P05204 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.14■□□□□ 0.81
HMGN2P05204 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.14■□□□□ 0.81
HMGN2P05204 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HMGN2P05204 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGN2P05204 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGN2P05204 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms