Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGN1P05114 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGN1P05114 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGN1P05114 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGN1P05114 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGN1P05114 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGN1P05114 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGN1P05114 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGN1P05114 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGN1P05114 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGN1P05114 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.52■□□□□ 0.72
HMGN1P05114 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGN1P05114 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGN1P05114 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
HMGN1P05114 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGN1P05114 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGN1P05114 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGN1P05114 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGN1P05114 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.52■□□□□ 0.71
HMGN1P05114 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.52■□□□□ 0.71
HMGN1P05114 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
HMGN1P05114 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGN1P05114 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
HMGN1P05114 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.51■□□□□ 0.71
HMGN1P05114 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HMGN1P05114 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGN1P05114 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGN1P05114 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGN1P05114 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGN1P05114 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HMGN1P05114 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGN1P05114 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HMGN1P05114 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGN1P05114 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGN1P05114 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGN1P05114 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGN1P05114 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGN1P05114 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGN1P05114 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HMGN1P05114 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HMGN1P05114 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGN1P05114 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.5■□□□□ 0.71
HMGN1P05114 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGN1P05114 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.5■□□□□ 0.71
HMGN1P05114 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGN1P05114 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGN1P05114 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
HMGN1P05114 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.5■□□□□ 0.71
HMGN1P05114 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.5■□□□□ 0.71
HMGN1P05114 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
HMGN1P05114 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HMGN1P05114 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGN1P05114 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGN1P05114 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGN1P05114 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGN1P05114 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.49■□□□□ 0.71
HMGN1P05114 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGN1P05114 SLC25A24-204ENST00000569674 2357 ntBASIC19.49■□□□□ 0.71
HMGN1P05114 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGN1P05114 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGN1P05114 AC005229.4-201ENST00000610085 2198 ntBASIC19.49■□□□□ 0.71
HMGN1P05114 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGN1P05114 MIR4787-201ENST00000607364 84 ntBASIC19.49■□□□□ 0.71
HMGN1P05114 AC010997.5-201ENST00000609182 354 ntBASIC19.49■□□□□ 0.71
HMGN1P05114 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGN1P05114 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGN1P05114 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HMGN1P05114 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGN1P05114 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.49■□□□□ 0.71
HMGN1P05114 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HMGN1P05114 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGN1P05114 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGN1P05114 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGN1P05114 Z98882.1-201ENST00000622160 2253 ntBASIC19.48■□□□□ 0.71
HMGN1P05114 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGN1P05114 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGN1P05114 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
HMGN1P05114 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HMGN1P05114 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGN1P05114 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGN1P05114 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGN1P05114 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGN1P05114 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
HMGN1P05114 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGN1P05114 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGN1P05114 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGN1P05114 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGN1P05114 AC079089.2-201ENST00000531211 1277 ntBASIC19.47■□□□□ 0.71
HMGN1P05114 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGN1P05114 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.47■□□□□ 0.71
HMGN1P05114 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGN1P05114 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGN1P05114 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGN1P05114 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGN1P05114 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGN1P05114 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGN1P05114 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGN1P05114 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HMGN1P05114 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGN1P05114 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms