Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHGBP05060 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHGBP05060 EP400NL-214ENST00000641289 2402 ntBASIC26.12■■□□□ 1.77
CHGBP05060 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHGBP05060 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
CHGBP05060 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.12■■□□□ 1.77
CHGBP05060 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CHGBP05060 AC087239.1-201ENST00000622671 572 ntBASIC26.12■■□□□ 1.77
CHGBP05060 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CHGBP05060 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHGBP05060 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
CHGBP05060 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.11■■□□□ 1.77
CHGBP05060 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.11■■□□□ 1.77
CHGBP05060 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
CHGBP05060 AC097381.1-201ENST00000429019 1296 ntBASIC26.11■■□□□ 1.77
CHGBP05060 AL358852.1-201ENST00000623174 1268 ntBASIC26.11■■□□□ 1.77
CHGBP05060 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
CHGBP05060 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.11■■□□□ 1.77
CHGBP05060 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.11■■□□□ 1.77
CHGBP05060 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHGBP05060 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
CHGBP05060 AC027612.3-201ENST00000413684 1047 ntBASIC26.1■■□□□ 1.77
CHGBP05060 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHGBP05060 AL354811.1-201ENST00000610286 706 ntBASIC26.1■■□□□ 1.77
CHGBP05060 MIR6821-201ENST00000617625 74 ntBASIC26.1■■□□□ 1.77
CHGBP05060 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHGBP05060 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHGBP05060 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHGBP05060 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHGBP05060 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHGBP05060 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.09■■□□□ 1.77
CHGBP05060 TPRG1LP1-201ENST00000598702 760 ntBASIC26.09■■□□□ 1.77
CHGBP05060 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.09■■□□□ 1.77
CHGBP05060 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHGBP05060 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.09■■□□□ 1.77
CHGBP05060 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
CHGBP05060 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CHGBP05060 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHGBP05060 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CHGBP05060 ESRRAP2-201ENST00000418437 1549 ntBASIC26.09■■□□□ 1.77
CHGBP05060 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHGBP05060 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.08■■□□□ 1.77
CHGBP05060 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHGBP05060 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CHGBP05060 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.08■■□□□ 1.77
CHGBP05060 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.08■■□□□ 1.77
CHGBP05060 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.08■■□□□ 1.77
CHGBP05060 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.08■■□□□ 1.77
CHGBP05060 AC026471.6-201ENST00000622954 1905 ntBASIC26.08■■□□□ 1.76
CHGBP05060 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHGBP05060 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHGBP05060 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHGBP05060 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHGBP05060 YBX1P1-201ENST00000445822 960 ntBASIC26.07■■□□□ 1.76
CHGBP05060 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.07■■□□□ 1.76
CHGBP05060 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.07■■□□□ 1.76
CHGBP05060 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.07■■□□□ 1.76
CHGBP05060 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.07■■□□□ 1.76
CHGBP05060 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHGBP05060 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHGBP05060 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHGBP05060 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CHGBP05060 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CHGBP05060 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.06■■□□□ 1.76
CHGBP05060 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHGBP05060 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHGBP05060 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHGBP05060 DUX4L2-201ENST00000561772 1275 ntBASIC26.06■■□□□ 1.76
CHGBP05060 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.06■■□□□ 1.76
CHGBP05060 KRT18P61-201ENST00000585825 1298 ntBASIC26.06■■□□□ 1.76
CHGBP05060 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.06■■□□□ 1.76
CHGBP05060 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.06■■□□□ 1.76
CHGBP05060 DUX4L6-201ENST00000626483 1275 ntBASIC26.06■■□□□ 1.76
CHGBP05060 DUX4L1-201ENST00000627662 1275 ntBASIC26.06■■□□□ 1.76
CHGBP05060 DUX4L8-201ENST00000629013 1275 ntBASIC26.06■■□□□ 1.76
CHGBP05060 DUX4L3-201ENST00000630187 1275 ntBASIC26.06■■□□□ 1.76
CHGBP05060 DUX4L7-201ENST00000630678 1275 ntBASIC26.06■■□□□ 1.76
CHGBP05060 DUX4L5-201ENST00000630834 1275 ntBASIC26.06■■□□□ 1.76
CHGBP05060 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.06■■□□□ 1.76
CHGBP05060 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHGBP05060 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHGBP05060 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
CHGBP05060 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.05■■□□□ 1.76
CHGBP05060 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHGBP05060 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CHGBP05060 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHGBP05060 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHGBP05060 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHGBP05060 BX005040.4-201ENST00000637145 1518 ntBASIC26.04■■□□□ 1.76
CHGBP05060 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CHGBP05060 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHGBP05060 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHGBP05060 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
CHGBP05060 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CHGBP05060 CCDC92B-201ENST00000575506 885 ntBASIC26.04■■□□□ 1.76
CHGBP05060 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.04■■□□□ 1.76
CHGBP05060 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHGBP05060 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHGBP05060 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.04■■□□□ 1.76
CHGBP05060 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms