Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.25■■□□□ 1.79
COL1A1P02452 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
COL1A1P02452 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL1A1P02452 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL1A1P02452 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL1A1P02452 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
COL1A1P02452 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.24■■□□□ 1.79
COL1A1P02452 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC26.24■■□□□ 1.79
COL1A1P02452 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL1A1P02452 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL1A1P02452 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.24■■□□□ 1.79
COL1A1P02452 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.24■■□□□ 1.79
COL1A1P02452 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL1A1P02452 KRT18P11-201ENST00000435214 1283 ntBASIC26.23■■□□□ 1.79
COL1A1P02452 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.23■■□□□ 1.79
COL1A1P02452 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.23■■□□□ 1.79
COL1A1P02452 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL1A1P02452 AC055733.4-201ENST00000638462 1354 ntBASIC26.23■■□□□ 1.79
COL1A1P02452 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
COL1A1P02452 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL1A1P02452 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.23■■□□□ 1.79
COL1A1P02452 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
COL1A1P02452 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL1A1P02452 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL1A1P02452 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL1A1P02452 KRT87P-202ENST00000534226 1464 ntBASIC26.23■■□□□ 1.79
COL1A1P02452 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
COL1A1P02452 MAP2K4P1-201ENST00000438453 1195 ntBASIC26.23■■□□□ 1.79
COL1A1P02452 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL1A1P02452 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC26.23■■□□□ 1.79
COL1A1P02452 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.23■■□□□ 1.79
COL1A1P02452 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC26.23■■□□□ 1.79
COL1A1P02452 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.23■■□□□ 1.79
COL1A1P02452 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC26.23■■□□□ 1.79
COL1A1P02452 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL1A1P02452 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
COL1A1P02452 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL1A1P02452 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL1A1P02452 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL1A1P02452 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
COL1A1P02452 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL1A1P02452 MIR663A-201ENST00000385250 93 ntBASIC26.22■■□□□ 1.79
COL1A1P02452 AL355802.2-201ENST00000402069 882 ntBASIC26.22■■□□□ 1.79
COL1A1P02452 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL1A1P02452 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL1A1P02452 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL1A1P02452 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
COL1A1P02452 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL1A1P02452 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL1A1P02452 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL1A1P02452 NCF1B-203ENST00000435988 1254 ntBASIC26.21■■□□□ 1.79
COL1A1P02452 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.21■■□□□ 1.79
COL1A1P02452 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.21■■□□□ 1.79
COL1A1P02452 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.21■■□□□ 1.79
COL1A1P02452 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.21■■□□□ 1.79
COL1A1P02452 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL1A1P02452 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
COL1A1P02452 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
COL1A1P02452 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.2■■□□□ 1.78
COL1A1P02452 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL1A1P02452 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.2■■□□□ 1.78
COL1A1P02452 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL1A1P02452 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL1A1P02452 AL109923.1-201ENST00000618799 583 ntBASIC26.2■■□□□ 1.78
COL1A1P02452 AC009237.3-201ENST00000393279 1427 ntBASIC26.2■■□□□ 1.78
COL1A1P02452 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.19■■□□□ 1.78
COL1A1P02452 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL1A1P02452 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.19■■□□□ 1.78
COL1A1P02452 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
COL1A1P02452 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL1A1P02452 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC26.19■■□□□ 1.78
COL1A1P02452 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL1A1P02452 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL1A1P02452 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
COL1A1P02452 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
COL1A1P02452 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL1A1P02452 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
COL1A1P02452 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL1A1P02452 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL1A1P02452 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL1A1P02452 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL1A1P02452 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL1A1P02452 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL1A1P02452 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.18■■□□□ 1.78
COL1A1P02452 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC26.18■■□□□ 1.78
COL1A1P02452 AC104187.1-201ENST00000607510 612 ntBASIC26.18■■□□□ 1.78
COL1A1P02452 AC137767.1-201ENST00000602918 1920 ntBASIC26.18■■□□□ 1.78
COL1A1P02452 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
COL1A1P02452 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL1A1P02452 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL1A1P02452 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
COL1A1P02452 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
COL1A1P02452 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
COL1A1P02452 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.17■■□□□ 1.78
COL1A1P02452 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC26.17■■□□□ 1.78
COL1A1P02452 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL1A1P02452 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL1A1P02452 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL1A1P02452 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL1A1P02452 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms