Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LTAP01374 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LTAP01374 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.27■□□□□ 0.19
LTAP01374 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LTAP01374 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
LTAP01374 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LTAP01374 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LTAP01374 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LTAP01374 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.26■□□□□ 0.19
LTAP01374 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LTAP01374 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.26■□□□□ 0.19
LTAP01374 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.26■□□□□ 0.19
LTAP01374 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LTAP01374 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LTAP01374 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.26■□□□□ 0.19
LTAP01374 AC074183.2-201ENST00000623112 922 ntBASIC16.26■□□□□ 0.19
LTAP01374 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LTAP01374 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.26■□□□□ 0.19
LTAP01374 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LTAP01374 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.26■□□□□ 0.19
LTAP01374 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LTAP01374 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LTAP01374 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LTAP01374 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.26■□□□□ 0.19
LTAP01374 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.26■□□□□ 0.19
LTAP01374 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.26■□□□□ 0.19
LTAP01374 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LTAP01374 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.25■□□□□ 0.19
LTAP01374 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.25■□□□□ 0.19
LTAP01374 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LTAP01374 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LTAP01374 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.25■□□□□ 0.19
LTAP01374 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.25■□□□□ 0.19
LTAP01374 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.25■□□□□ 0.19
LTAP01374 BHLHE23-202ENST00000612929 1109 ntBASIC16.25■□□□□ 0.19
LTAP01374 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.25■□□□□ 0.19
LTAP01374 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LTAP01374 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LTAP01374 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.25■□□□□ 0.19
LTAP01374 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LTAP01374 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LTAP01374 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LTAP01374 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
LTAP01374 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
LTAP01374 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
LTAP01374 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.24■□□□□ 0.19
LTAP01374 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
LTAP01374 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
LTAP01374 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.24■□□□□ 0.19
LTAP01374 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.24■□□□□ 0.19
LTAP01374 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.24■□□□□ 0.19
LTAP01374 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LTAP01374 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LTAP01374 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
LTAP01374 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LTAP01374 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LTAP01374 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LTAP01374 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LTAP01374 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LTAP01374 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LTAP01374 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.23■□□□□ 0.19
LTAP01374 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LTAP01374 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LTAP01374 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LTAP01374 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.23■□□□□ 0.19
LTAP01374 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LTAP01374 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LTAP01374 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LTAP01374 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
LTAP01374 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.23■□□□□ 0.19
LTAP01374 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LTAP01374 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LTAP01374 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LTAP01374 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LTAP01374 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LTAP01374 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LTAP01374 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LTAP01374 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.22■□□□□ 0.19
LTAP01374 PVT1_1.1-201ENST00000615125 194 ntBASIC16.22■□□□□ 0.19
LTAP01374 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.22■□□□□ 0.19
LTAP01374 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LTAP01374 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LTAP01374 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.22■□□□□ 0.19
LTAP01374 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.22■□□□□ 0.19
LTAP01374 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.22■□□□□ 0.19
LTAP01374 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LTAP01374 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms