Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDRT1O95170 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDRT1O95170 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDRT1O95170 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.21■□□□□ 0.67
CDRT1O95170 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDRT1O95170 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDRT1O95170 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDRT1O95170 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.21■□□□□ 0.67
CDRT1O95170 LINC01960-201ENST00000563759 1884 ntBASIC19.21■□□□□ 0.67
CDRT1O95170 AC074183.2-201ENST00000623112 922 ntBASIC19.21■□□□□ 0.67
CDRT1O95170 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.21■□□□□ 0.67
CDRT1O95170 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.21■□□□□ 0.67
CDRT1O95170 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CDRT1O95170 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CDRT1O95170 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDRT1O95170 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDRT1O95170 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDRT1O95170 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CDRT1O95170 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDRT1O95170 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CDRT1O95170 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDRT1O95170 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDRT1O95170 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDRT1O95170 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDRT1O95170 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.2■□□□□ 0.66
CDRT1O95170 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.19■□□□□ 0.66
CDRT1O95170 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDRT1O95170 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CDRT1O95170 TSPY13P-201ENST00000338964 914 ntBASIC19.19■□□□□ 0.66
CDRT1O95170 AC004448.1-201ENST00000458332 883 ntBASIC19.19■□□□□ 0.66
CDRT1O95170 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CDRT1O95170 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDRT1O95170 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDRT1O95170 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDRT1O95170 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.19■□□□□ 0.66
CDRT1O95170 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDRT1O95170 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDRT1O95170 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDRT1O95170 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDRT1O95170 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDRT1O95170 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDRT1O95170 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDRT1O95170 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDRT1O95170 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDRT1O95170 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.18■□□□□ 0.66
CDRT1O95170 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CDRT1O95170 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDRT1O95170 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDRT1O95170 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.17■□□□□ 0.66
CDRT1O95170 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDRT1O95170 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDRT1O95170 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CDRT1O95170 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.17■□□□□ 0.66
CDRT1O95170 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDRT1O95170 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDRT1O95170 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDRT1O95170 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDRT1O95170 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.17■□□□□ 0.66
CDRT1O95170 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDRT1O95170 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CDRT1O95170 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDRT1O95170 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CDRT1O95170 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDRT1O95170 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.17■□□□□ 0.66
CDRT1O95170 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDRT1O95170 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CDRT1O95170 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.16■□□□□ 0.66
CDRT1O95170 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT1O95170 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT1O95170 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT1O95170 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT1O95170 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.16■□□□□ 0.66
CDRT1O95170 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.16■□□□□ 0.66
CDRT1O95170 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT1O95170 RNF165-205ENST00000588679 2904 ntBASIC19.16■□□□□ 0.66
CDRT1O95170 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT1O95170 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT1O95170 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT1O95170 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CDRT1O95170 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT1O95170 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.16■□□□□ 0.66
CDRT1O95170 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT1O95170 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT1O95170 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDRT1O95170 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.15■□□□□ 0.66
CDRT1O95170 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDRT1O95170 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDRT1O95170 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDRT1O95170 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.15■□□□□ 0.66
CDRT1O95170 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.15■□□□□ 0.66
CDRT1O95170 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CDRT1O95170 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDRT1O95170 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDRT1O95170 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.15■□□□□ 0.66
CDRT1O95170 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDRT1O95170 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDRT1O95170 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDRT1O95170 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDRT1O95170 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDRT1O95170 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms