Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GPC4O75487 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.58■■□□□ 1.05
GPC4O75487 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
GPC4O75487 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GPC4O75487 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GPC4O75487 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GPC4O75487 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GPC4O75487 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GPC4O75487 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.58■■□□□ 1.05
GPC4O75487 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
GPC4O75487 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.58■■□□□ 1.05
GPC4O75487 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
GPC4O75487 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.58■■□□□ 1.04
GPC4O75487 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GPC4O75487 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.58■■□□□ 1.04
GPC4O75487 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
GPC4O75487 AC135279.3-201ENST00000610945 1311 ntBASIC21.57■■□□□ 1.04
GPC4O75487 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GPC4O75487 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GPC4O75487 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
GPC4O75487 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
GPC4O75487 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.57■■□□□ 1.04
GPC4O75487 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
GPC4O75487 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GPC4O75487 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GPC4O75487 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GPC4O75487 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.56■■□□□ 1.04
GPC4O75487 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.56■■□□□ 1.04
GPC4O75487 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GPC4O75487 AC106739.1-201ENST00000617035 715 ntBASIC21.56■■□□□ 1.04
GPC4O75487 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
GPC4O75487 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
GPC4O75487 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.56■■□□□ 1.04
GPC4O75487 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
GPC4O75487 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.56■■□□□ 1.04
GPC4O75487 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GPC4O75487 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GPC4O75487 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GPC4O75487 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.55■■□□□ 1.04
GPC4O75487 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.55■■□□□ 1.04
GPC4O75487 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.55■■□□□ 1.04
GPC4O75487 MIR4767-201ENST00000582827 78 ntBASIC21.55■■□□□ 1.04
GPC4O75487 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.55■■□□□ 1.04
GPC4O75487 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
GPC4O75487 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.55■■□□□ 1.04
GPC4O75487 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GPC4O75487 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GPC4O75487 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
GPC4O75487 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GPC4O75487 AC087742.1-201ENST00000575880 1738 ntBASIC21.55■■□□□ 1.04
GPC4O75487 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
GPC4O75487 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
GPC4O75487 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GPC4O75487 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.54■■□□□ 1.04
GPC4O75487 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GPC4O75487 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GPC4O75487 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.54■■□□□ 1.04
GPC4O75487 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
GPC4O75487 PBX2P1-201ENST00000493219 1291 ntBASIC21.54■■□□□ 1.04
GPC4O75487 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.54■■□□□ 1.04
GPC4O75487 AL031602.1-201ENST00000633169 911 ntBASIC21.54■■□□□ 1.04
GPC4O75487 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
GPC4O75487 AC092053.2-201ENST00000640557 1818 ntBASIC21.54■■□□□ 1.04
GPC4O75487 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GPC4O75487 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GPC4O75487 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
GPC4O75487 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.54■■□□□ 1.04
GPC4O75487 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GPC4O75487 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GPC4O75487 LINC01960-201ENST00000563759 1884 ntBASIC21.54■■□□□ 1.04
GPC4O75487 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GPC4O75487 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GPC4O75487 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GPC4O75487 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.53■■□□□ 1.04
GPC4O75487 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GPC4O75487 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
GPC4O75487 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GPC4O75487 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GPC4O75487 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
GPC4O75487 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.53■■□□□ 1.04
GPC4O75487 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.53■■□□□ 1.04
GPC4O75487 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.53■■□□□ 1.04
GPC4O75487 AL139246.5-201ENST00000606645 996 ntBASIC21.53■■□□□ 1.04
GPC4O75487 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GPC4O75487 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GPC4O75487 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
GPC4O75487 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.53■■□□□ 1.04
GPC4O75487 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GPC4O75487 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
GPC4O75487 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GPC4O75487 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
GPC4O75487 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GPC4O75487 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.52■■□□□ 1.04
GPC4O75487 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.52■■□□□ 1.04
GPC4O75487 AC010525.1-201ENST00000585559 441 ntBASIC21.52■■□□□ 1.04
GPC4O75487 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GPC4O75487 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GPC4O75487 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GPC4O75487 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GPC4O75487 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms