Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
BRD4O60885 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC30.08■■■□□ 2.41
BRD4O60885 TK2-208ENST00000545043 1120 ntTSL 2 BASIC30.08■■■□□ 2.41
BRD4O60885 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC30.08■■■□□ 2.41
BRD4O60885 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
BRD4O60885 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC30.08■■■□□ 2.41
BRD4O60885 WWOX-218ENST00000627394 894 ntTSL 5 BASIC30.08■■■□□ 2.41
BRD4O60885 EI24-211ENST00000534546 1544 ntTSL 2 BASIC30.08■■■□□ 2.41
BRD4O60885 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC30.08■■■□□ 2.41
BRD4O60885 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
BRD4O60885 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
BRD4O60885 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
BRD4O60885 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
BRD4O60885 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
BRD4O60885 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC30.07■■■□□ 2.4
BRD4O60885 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC30.07■■■□□ 2.4
BRD4O60885 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
BRD4O60885 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
BRD4O60885 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
BRD4O60885 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC30.07■■■□□ 2.4
BRD4O60885 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
BRD4O60885 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
BRD4O60885 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC30.06■■■□□ 2.4
BRD4O60885 KRT19P1-201ENST00000405746 1186 ntBASIC30.06■■■□□ 2.4
BRD4O60885 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC30.06■■■□□ 2.4
BRD4O60885 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC30.06■■■□□ 2.4
BRD4O60885 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
BRD4O60885 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC30.06■■■□□ 2.4
BRD4O60885 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
BRD4O60885 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
BRD4O60885 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
BRD4O60885 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
BRD4O60885 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
BRD4O60885 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
BRD4O60885 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
BRD4O60885 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC30.05■■■□□ 2.4
BRD4O60885 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
BRD4O60885 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
BRD4O60885 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
BRD4O60885 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
BRD4O60885 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
BRD4O60885 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC30.04■■■□□ 2.4
BRD4O60885 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
BRD4O60885 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
BRD4O60885 AC004687.1-201ENST00000579003 1625 ntBASIC30.04■■■□□ 2.4
BRD4O60885 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
BRD4O60885 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
BRD4O60885 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
BRD4O60885 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
BRD4O60885 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC30.03■■■□□ 2.4
BRD4O60885 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC30.03■■■□□ 2.4
BRD4O60885 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC30.03■■■□□ 2.4
BRD4O60885 COMT-203ENST00000403184 2217 ntTSL 2 BASIC30.02■■■□□ 2.4
BRD4O60885 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
BRD4O60885 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC30.02■■■□□ 2.4
BRD4O60885 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC30.02■■■□□ 2.4
BRD4O60885 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
BRD4O60885 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC30.02■■■□□ 2.4
BRD4O60885 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
BRD4O60885 BID-214ENST00000617586 542 ntTSL 5 BASIC30.02■■■□□ 2.4
BRD4O60885 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC30.02■■■□□ 2.4
BRD4O60885 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
BRD4O60885 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
BRD4O60885 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
BRD4O60885 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC30.01■■■□□ 2.39
BRD4O60885 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
BRD4O60885 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
BRD4O60885 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
BRD4O60885 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
BRD4O60885 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
BRD4O60885 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
BRD4O60885 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
BRD4O60885 AC026185.1-201ENST00000445748 174 ntBASIC30.01■■■□□ 2.39
BRD4O60885 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC30■■■□□ 2.39
BRD4O60885 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC30■■■□□ 2.39
BRD4O60885 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
BRD4O60885 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC30■■■□□ 2.39
BRD4O60885 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
BRD4O60885 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC30■■■□□ 2.39
BRD4O60885 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC30■■■□□ 2.39
BRD4O60885 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
BRD4O60885 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
BRD4O60885 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
BRD4O60885 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
BRD4O60885 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC29.99■■■□□ 2.39
BRD4O60885 KRT18P11-201ENST00000435214 1283 ntBASIC29.99■■■□□ 2.39
BRD4O60885 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC29.99■■■□□ 2.39
BRD4O60885 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC29.99■■■□□ 2.39
BRD4O60885 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC29.99■■■□□ 2.39
BRD4O60885 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC29.99■■■□□ 2.39
BRD4O60885 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC29.99■■■□□ 2.39
BRD4O60885 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
BRD4O60885 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC29.99■■■□□ 2.39
BRD4O60885 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
BRD4O60885 OXCT2P1-201ENST00000447263 1535 ntBASIC29.98■■■□□ 2.39
BRD4O60885 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC29.98■■■□□ 2.39
BRD4O60885 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
BRD4O60885 METTL26-203ENST00000397664 604 ntTSL 2 BASIC29.98■■■□□ 2.39
BRD4O60885 EMC9-206ENST00000560403 872 ntTSL 2 BASIC29.98■■■□□ 2.39
BRD4O60885 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms