Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CACNA1FO60840 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC27.46■■□□□ 1.99
CACNA1FO60840 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CACNA1FO60840 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
CACNA1FO60840 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CACNA1FO60840 MFF-207ENST00000409565 1548 ntTSL 2 BASIC27.46■■□□□ 1.99
CACNA1FO60840 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
CACNA1FO60840 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CACNA1FO60840 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
CACNA1FO60840 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC27.45■■□□□ 1.99
CACNA1FO60840 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.99
CACNA1FO60840 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
CACNA1FO60840 KRT87P-202ENST00000534226 1464 ntBASIC27.45■■□□□ 1.98
CACNA1FO60840 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CACNA1FO60840 AL162430.1-201ENST00000480705 870 ntBASIC27.45■■□□□ 1.98
CACNA1FO60840 AC104564.3-201ENST00000582367 638 ntBASIC27.45■■□□□ 1.98
CACNA1FO60840 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC27.45■■□□□ 1.98
CACNA1FO60840 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
CACNA1FO60840 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CACNA1FO60840 AC055733.4-201ENST00000638462 1354 ntBASIC27.45■■□□□ 1.98
CACNA1FO60840 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC27.45■■□□□ 1.98
CACNA1FO60840 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
CACNA1FO60840 AC242852.2-201ENST00000615738 1807 ntBASIC27.44■■□□□ 1.98
CACNA1FO60840 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC27.44■■□□□ 1.98
CACNA1FO60840 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC27.44■■□□□ 1.98
CACNA1FO60840 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
CACNA1FO60840 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CACNA1FO60840 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CACNA1FO60840 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CACNA1FO60840 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CACNA1FO60840 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CACNA1FO60840 ME3-201ENST00000323418 1068 ntTSL 5 BASIC27.44■■□□□ 1.98
CACNA1FO60840 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC27.44■■□□□ 1.98
CACNA1FO60840 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CACNA1FO60840 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CACNA1FO60840 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
CACNA1FO60840 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
CACNA1FO60840 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CACNA1FO60840 PXK-203ENST00000383715 1756 ntTSL 5 BASIC27.43■■□□□ 1.98
CACNA1FO60840 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CACNA1FO60840 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CACNA1FO60840 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
CACNA1FO60840 AC092053.2-201ENST00000640557 1818 ntBASIC27.43■■□□□ 1.98
CACNA1FO60840 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
CACNA1FO60840 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC27.42■■□□□ 1.98
CACNA1FO60840 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CACNA1FO60840 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CACNA1FO60840 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
CACNA1FO60840 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
CACNA1FO60840 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC27.42■■□□□ 1.98
CACNA1FO60840 AC233723.2-201ENST00000623798 2106 ntBASIC27.42■■□□□ 1.98
CACNA1FO60840 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC27.42■■□□□ 1.98
CACNA1FO60840 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CACNA1FO60840 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CACNA1FO60840 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CACNA1FO60840 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC27.42■■□□□ 1.98
CACNA1FO60840 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CACNA1FO60840 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC27.42■■□□□ 1.98
CACNA1FO60840 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CACNA1FO60840 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CACNA1FO60840 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CACNA1FO60840 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
CACNA1FO60840 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CACNA1FO60840 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CACNA1FO60840 KRT18P61-201ENST00000585825 1298 ntBASIC27.41■■□□□ 1.98
CACNA1FO60840 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CACNA1FO60840 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CACNA1FO60840 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC27.41■■□□□ 1.98
CACNA1FO60840 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CACNA1FO60840 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CACNA1FO60840 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CACNA1FO60840 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC27.4■■□□□ 1.98
CACNA1FO60840 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
CACNA1FO60840 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC27.4■■□□□ 1.98
CACNA1FO60840 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC27.4■■□□□ 1.98
CACNA1FO60840 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CACNA1FO60840 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC27.4■■□□□ 1.98
CACNA1FO60840 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC27.4■■□□□ 1.98
CACNA1FO60840 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
CACNA1FO60840 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC27.4■■□□□ 1.98
CACNA1FO60840 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
CACNA1FO60840 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CACNA1FO60840 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
CACNA1FO60840 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC27.4■■□□□ 1.98
CACNA1FO60840 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC27.4■■□□□ 1.98
CACNA1FO60840 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CACNA1FO60840 LTK-203ENST00000453182 2412 ntTSL 2 BASIC27.39■■□□□ 1.98
CACNA1FO60840 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC27.39■■□□□ 1.98
CACNA1FO60840 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
CACNA1FO60840 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
CACNA1FO60840 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
CACNA1FO60840 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CACNA1FO60840 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CACNA1FO60840 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
CACNA1FO60840 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC27.39■■□□□ 1.98
CACNA1FO60840 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
CACNA1FO60840 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CACNA1FO60840 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CACNA1FO60840 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC27.39■■□□□ 1.98
CACNA1FO60840 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms