Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC25.41■■□□□ 1.66
CTNND1O60716 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.41■■□□□ 1.66
CTNND1O60716 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CTNND1O60716 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
CTNND1O60716 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CTNND1O60716 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CTNND1O60716 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.4■■□□□ 1.66
CTNND1O60716 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CTNND1O60716 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
CTNND1O60716 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.4■■□□□ 1.66
CTNND1O60716 AL050303.2-201ENST00000619798 666 ntBASIC25.4■■□□□ 1.66
CTNND1O60716 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.4■■□□□ 1.66
CTNND1O60716 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.4■■□□□ 1.66
CTNND1O60716 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CTNND1O60716 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
CTNND1O60716 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CTNND1O60716 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
CTNND1O60716 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CTNND1O60716 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
CTNND1O60716 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CTNND1O60716 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
CTNND1O60716 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.39■■□□□ 1.66
CTNND1O60716 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.39■■□□□ 1.66
CTNND1O60716 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
CTNND1O60716 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.39■■□□□ 1.66
CTNND1O60716 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25.39■■□□□ 1.66
CTNND1O60716 AL121832.2-201ENST00000610979 668 ntBASIC25.39■■□□□ 1.66
CTNND1O60716 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CTNND1O60716 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
CTNND1O60716 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CTNND1O60716 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.39■■□□□ 1.65
CTNND1O60716 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CTNND1O60716 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25.38■■□□□ 1.65
CTNND1O60716 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CTNND1O60716 AC142086.2-201ENST00000569753 217 ntBASIC25.38■■□□□ 1.65
CTNND1O60716 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.38■■□□□ 1.65
CTNND1O60716 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.38■■□□□ 1.65
CTNND1O60716 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CTNND1O60716 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CTNND1O60716 DUSP8P5-201ENST00000422884 1815 ntBASIC25.37■■□□□ 1.65
CTNND1O60716 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CTNND1O60716 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CTNND1O60716 AC007322.1-201ENST00000426983 750 ntBASIC25.37■■□□□ 1.65
CTNND1O60716 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.37■■□□□ 1.65
CTNND1O60716 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.37■■□□□ 1.65
CTNND1O60716 AC083906.2-201ENST00000511578 360 ntBASIC25.37■■□□□ 1.65
CTNND1O60716 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.37■■□□□ 1.65
CTNND1O60716 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.37■■□□□ 1.65
CTNND1O60716 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.37■■□□□ 1.65
CTNND1O60716 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC25.37■■□□□ 1.65
CTNND1O60716 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.37■■□□□ 1.65
CTNND1O60716 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.37■■□□□ 1.65
CTNND1O60716 GAMT-205ENST00000640762 751 ntTSL 5 BASIC25.37■■□□□ 1.65
CTNND1O60716 MYCNOS-205ENST00000641950 531 ntBASIC25.37■■□□□ 1.65
CTNND1O60716 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CTNND1O60716 LINC01960-201ENST00000563759 1884 ntBASIC25.36■■□□□ 1.65
CTNND1O60716 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.36■■□□□ 1.65
CTNND1O60716 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CTNND1O60716 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CTNND1O60716 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CTNND1O60716 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CTNND1O60716 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CTNND1O60716 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CTNND1O60716 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CTNND1O60716 ABHD17AP1-201ENST00000358206 933 ntBASIC25.35■■□□□ 1.65
CTNND1O60716 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.35■■□□□ 1.65
CTNND1O60716 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.35■■□□□ 1.65
CTNND1O60716 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.35■■□□□ 1.65
CTNND1O60716 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CTNND1O60716 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.35■■□□□ 1.65
CTNND1O60716 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
CTNND1O60716 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
CTNND1O60716 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.34■■□□□ 1.65
CTNND1O60716 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CTNND1O60716 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CTNND1O60716 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CTNND1O60716 TSPY6P-201ENST00000448518 926 ntBASIC25.34■■□□□ 1.65
CTNND1O60716 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CTNND1O60716 AC005181.1-201ENST00000604782 1256 ntBASIC25.34■■□□□ 1.65
CTNND1O60716 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CTNND1O60716 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.34■■□□□ 1.65
CTNND1O60716 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.34■■□□□ 1.65
CTNND1O60716 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CTNND1O60716 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CTNND1O60716 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CTNND1O60716 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.33■■□□□ 1.65
CTNND1O60716 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.33■■□□□ 1.65
CTNND1O60716 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CTNND1O60716 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
CTNND1O60716 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.33■■□□□ 1.65
CTNND1O60716 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.33■■□□□ 1.65
CTNND1O60716 AC093323.1-202ENST00000635031 2045 ntBASIC25.33■■□□□ 1.65
CTNND1O60716 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
CTNND1O60716 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CTNND1O60716 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CTNND1O60716 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CTNND1O60716 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.32■■□□□ 1.64
CTNND1O60716 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.32■■□□□ 1.64
CTNND1O60716 SLC7A5P2-201ENST00000553010 536 ntBASIC25.32■■□□□ 1.64
CTNND1O60716 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms