Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DLX3O60479 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DLX3O60479 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
DLX3O60479 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DLX3O60479 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
DLX3O60479 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DLX3O60479 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DLX3O60479 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DLX3O60479 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.2■□□□□ 0.98
DLX3O60479 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DLX3O60479 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DLX3O60479 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DLX3O60479 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.2■□□□□ 0.98
DLX3O60479 AC026471.6-201ENST00000622954 1905 ntBASIC21.2■□□□□ 0.98
DLX3O60479 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.2■□□□□ 0.98
DLX3O60479 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.2■□□□□ 0.98
DLX3O60479 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
DLX3O60479 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DLX3O60479 Z98882.1-201ENST00000622160 2253 ntBASIC21.2■□□□□ 0.98
DLX3O60479 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DLX3O60479 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DLX3O60479 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DLX3O60479 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
DLX3O60479 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DLX3O60479 KRT16P3-201ENST00000439127 1283 ntBASIC21.19■□□□□ 0.98
DLX3O60479 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DLX3O60479 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.19■□□□□ 0.98
DLX3O60479 AC099791.2-201ENST00000605725 427 ntBASIC21.19■□□□□ 0.98
DLX3O60479 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.19■□□□□ 0.98
DLX3O60479 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DLX3O60479 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.19■□□□□ 0.98
DLX3O60479 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DLX3O60479 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DLX3O60479 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
DLX3O60479 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DLX3O60479 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.18■□□□□ 0.98
DLX3O60479 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
DLX3O60479 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DLX3O60479 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.18■□□□□ 0.98
DLX3O60479 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DLX3O60479 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DLX3O60479 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.17■□□□□ 0.98
DLX3O60479 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.17■□□□□ 0.98
DLX3O60479 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
DLX3O60479 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.17■□□□□ 0.98
DLX3O60479 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.17■□□□□ 0.98
DLX3O60479 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DLX3O60479 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.17■□□□□ 0.98
DLX3O60479 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.17■□□□□ 0.98
DLX3O60479 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
DLX3O60479 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DLX3O60479 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
DLX3O60479 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DLX3O60479 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DLX3O60479 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.16■□□□□ 0.98
DLX3O60479 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.16■□□□□ 0.98
DLX3O60479 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DLX3O60479 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DLX3O60479 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DLX3O60479 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DLX3O60479 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DLX3O60479 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DLX3O60479 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DLX3O60479 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DLX3O60479 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.16■□□□□ 0.98
DLX3O60479 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.16■□□□□ 0.98
DLX3O60479 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
DLX3O60479 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.15■□□□□ 0.98
DLX3O60479 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DLX3O60479 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.15■□□□□ 0.98
DLX3O60479 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DLX3O60479 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DLX3O60479 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DLX3O60479 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.15■□□□□ 0.98
DLX3O60479 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.15■□□□□ 0.98
DLX3O60479 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.15■□□□□ 0.98
DLX3O60479 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DLX3O60479 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
DLX3O60479 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.15■□□□□ 0.98
DLX3O60479 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DLX3O60479 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DLX3O60479 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DLX3O60479 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.14■□□□□ 0.98
DLX3O60479 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
DLX3O60479 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.14■□□□□ 0.97
DLX3O60479 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.14■□□□□ 0.97
DLX3O60479 MIR3181-201ENST00000578512 73 ntBASIC21.14■□□□□ 0.97
DLX3O60479 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.14■□□□□ 0.97
DLX3O60479 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DLX3O60479 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DLX3O60479 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DLX3O60479 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.14■□□□□ 0.97
DLX3O60479 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
DLX3O60479 OR7E47P-201ENST00000546390 1422 ntBASIC21.13■□□□□ 0.97
DLX3O60479 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DLX3O60479 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
DLX3O60479 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DLX3O60479 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DLX3O60479 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DLX3O60479 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms