Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRICKLE3O43900 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRICKLE3O43900 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.8■□□□□ 0.92
PRICKLE3O43900 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.8■□□□□ 0.92
PRICKLE3O43900 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRICKLE3O43900 GUSBP5-202ENST00000510805 1989 ntBASIC20.8■□□□□ 0.92
PRICKLE3O43900 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRICKLE3O43900 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PRICKLE3O43900 AC123595.1-201ENST00000440769 1046 ntBASIC20.8■□□□□ 0.92
PRICKLE3O43900 YBX1P1-201ENST00000445822 960 ntBASIC20.8■□□□□ 0.92
PRICKLE3O43900 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRICKLE3O43900 MIR6821-201ENST00000617625 74 ntBASIC20.8■□□□□ 0.92
PRICKLE3O43900 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PRICKLE3O43900 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRICKLE3O43900 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PRICKLE3O43900 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRICKLE3O43900 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRICKLE3O43900 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRICKLE3O43900 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.79■□□□□ 0.92
PRICKLE3O43900 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRICKLE3O43900 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRICKLE3O43900 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRICKLE3O43900 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRICKLE3O43900 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRICKLE3O43900 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRICKLE3O43900 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PRICKLE3O43900 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRICKLE3O43900 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRICKLE3O43900 AC097381.1-201ENST00000429019 1296 ntBASIC20.79■□□□□ 0.92
PRICKLE3O43900 RARRES2P6-201ENST00000567333 442 ntBASIC20.79■□□□□ 0.92
PRICKLE3O43900 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.79■□□□□ 0.92
PRICKLE3O43900 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRICKLE3O43900 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRICKLE3O43900 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRICKLE3O43900 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRICKLE3O43900 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRICKLE3O43900 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRICKLE3O43900 AC242852.2-201ENST00000615738 1807 ntBASIC20.78■□□□□ 0.92
PRICKLE3O43900 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.78■□□□□ 0.92
PRICKLE3O43900 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRICKLE3O43900 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.78■□□□□ 0.92
PRICKLE3O43900 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRICKLE3O43900 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRICKLE3O43900 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRICKLE3O43900 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
PRICKLE3O43900 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.77■□□□□ 0.92
PRICKLE3O43900 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.77■□□□□ 0.92
PRICKLE3O43900 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRICKLE3O43900 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PRICKLE3O43900 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PRICKLE3O43900 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRICKLE3O43900 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRICKLE3O43900 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRICKLE3O43900 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRICKLE3O43900 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRICKLE3O43900 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.77■□□□□ 0.92
PRICKLE3O43900 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRICKLE3O43900 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.77■□□□□ 0.92
PRICKLE3O43900 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRICKLE3O43900 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRICKLE3O43900 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.77■□□□□ 0.92
PRICKLE3O43900 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRICKLE3O43900 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
PRICKLE3O43900 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PRICKLE3O43900 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
PRICKLE3O43900 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.77■□□□□ 0.91
PRICKLE3O43900 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PRICKLE3O43900 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
PRICKLE3O43900 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.76■□□□□ 0.91
PRICKLE3O43900 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PRICKLE3O43900 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRICKLE3O43900 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.76■□□□□ 0.91
PRICKLE3O43900 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRICKLE3O43900 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
PRICKLE3O43900 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRICKLE3O43900 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRICKLE3O43900 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.76■□□□□ 0.91
PRICKLE3O43900 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRICKLE3O43900 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.76■□□□□ 0.91
PRICKLE3O43900 AP004607.7-201ENST00000527152 1677 ntBASIC20.76■□□□□ 0.91
PRICKLE3O43900 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PRICKLE3O43900 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PRICKLE3O43900 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRICKLE3O43900 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.76■□□□□ 0.91
PRICKLE3O43900 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRICKLE3O43900 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRICKLE3O43900 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PRICKLE3O43900 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRICKLE3O43900 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRICKLE3O43900 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRICKLE3O43900 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRICKLE3O43900 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRICKLE3O43900 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PRICKLE3O43900 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PRICKLE3O43900 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.75■□□□□ 0.91
PRICKLE3O43900 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.75■□□□□ 0.91
PRICKLE3O43900 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRICKLE3O43900 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRICKLE3O43900 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRICKLE3O43900 ECEL1P1-201ENST00000373592 1742 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms