Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAF3IP2O43734 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAF3IP2O43734 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF3IP2O43734 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF3IP2O43734 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF3IP2O43734 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF3IP2O43734 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRAF3IP2O43734 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF3IP2O43734 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.27■□□□□ 0.68
TRAF3IP2O43734 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF3IP2O43734 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF3IP2O43734 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF3IP2O43734 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF3IP2O43734 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF3IP2O43734 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF3IP2O43734 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
TRAF3IP2O43734 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF3IP2O43734 AC091305.1-201ENST00000479476 895 ntBASIC19.27■□□□□ 0.68
TRAF3IP2O43734 SUDS3P1-201ENST00000505831 966 ntBASIC19.27■□□□□ 0.68
TRAF3IP2O43734 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.27■□□□□ 0.68
TRAF3IP2O43734 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF3IP2O43734 AL136967.2-201ENST00000623968 743 ntBASIC19.27■□□□□ 0.68
TRAF3IP2O43734 RASA4CP-201ENST00000424092 1398 ntBASIC19.27■□□□□ 0.68
TRAF3IP2O43734 C11orf96-202ENST00000528572 1834 ntBASIC19.27■□□□□ 0.68
TRAF3IP2O43734 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRAF3IP2O43734 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRAF3IP2O43734 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAF3IP2O43734 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAF3IP2O43734 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF3IP2O43734 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF3IP2O43734 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF3IP2O43734 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAF3IP2O43734 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF3IP2O43734 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF3IP2O43734 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TRAF3IP2O43734 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAF3IP2O43734 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.25■□□□□ 0.67
TRAF3IP2O43734 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRAF3IP2O43734 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP2O43734 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 TSPY26P-201ENST00000476365 1326 ntBASIC19.23■□□□□ 0.67
TRAF3IP2O43734 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAF3IP2O43734 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP2O43734 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP2O43734 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRAF3IP2O43734 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms