Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD6O43541 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD6O43541 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD6O43541 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.92■■□□□ 1.1
SMAD6O43541 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD6O43541 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.92■■□□□ 1.1
SMAD6O43541 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD6O43541 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.92■■□□□ 1.1
SMAD6O43541 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.92■■□□□ 1.1
SMAD6O43541 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD6O43541 AC092666.2-201ENST00000613287 246 ntBASIC21.92■■□□□ 1.1
SMAD6O43541 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SMAD6O43541 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD6O43541 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD6O43541 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD6O43541 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMAD6O43541 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMAD6O43541 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
SMAD6O43541 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SMAD6O43541 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.91■■□□□ 1.1
SMAD6O43541 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.91■■□□□ 1.1
SMAD6O43541 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.91■■□□□ 1.1
SMAD6O43541 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMAD6O43541 AC104564.3-201ENST00000582367 638 ntBASIC21.91■■□□□ 1.1
SMAD6O43541 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.91■■□□□ 1.1
SMAD6O43541 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.91■■□□□ 1.1
SMAD6O43541 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SMAD6O43541 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.91■■□□□ 1.1
SMAD6O43541 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SMAD6O43541 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMAD6O43541 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMAD6O43541 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMAD6O43541 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMAD6O43541 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMAD6O43541 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMAD6O43541 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.9■■□□□ 1.1
SMAD6O43541 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMAD6O43541 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMAD6O43541 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.9■■□□□ 1.1
SMAD6O43541 KRT18P61-201ENST00000585825 1298 ntBASIC21.9■■□□□ 1.1
SMAD6O43541 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.9■■□□□ 1.1
SMAD6O43541 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SMAD6O43541 AP004607.7-201ENST00000527152 1677 ntBASIC21.9■■□□□ 1.1
SMAD6O43541 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.9■■□□□ 1.1
SMAD6O43541 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMAD6O43541 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMAD6O43541 AC080038.3-201ENST00000623346 1952 ntBASIC21.9■■□□□ 1.1
SMAD6O43541 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.9■■□□□ 1.1
SMAD6O43541 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMAD6O43541 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMAD6O43541 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMAD6O43541 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMAD6O43541 AC005224.4-201ENST00000583262 1652 ntBASIC21.89■■□□□ 1.1
SMAD6O43541 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMAD6O43541 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMAD6O43541 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMAD6O43541 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.89■■□□□ 1.09
SMAD6O43541 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.89■■□□□ 1.09
SMAD6O43541 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMAD6O43541 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMAD6O43541 NTF6G-201ENST00000591094 616 ntBASIC21.89■■□□□ 1.09
SMAD6O43541 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMAD6O43541 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SMAD6O43541 ESRRAP2-201ENST00000418437 1549 ntBASIC21.89■■□□□ 1.09
SMAD6O43541 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.89■■□□□ 1.09
SMAD6O43541 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.89■■□□□ 1.09
SMAD6O43541 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMAD6O43541 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMAD6O43541 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD6O43541 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD6O43541 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD6O43541 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD6O43541 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SMAD6O43541 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.88■■□□□ 1.09
SMAD6O43541 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD6O43541 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SMAD6O43541 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD6O43541 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SMAD6O43541 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.88■■□□□ 1.09
SMAD6O43541 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SMAD6O43541 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.88■■□□□ 1.09
SMAD6O43541 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SMAD6O43541 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD6O43541 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD6O43541 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD6O43541 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD6O43541 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD6O43541 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMAD6O43541 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMAD6O43541 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
SMAD6O43541 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.87■■□□□ 1.09
SMAD6O43541 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.87■■□□□ 1.09
SMAD6O43541 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SMAD6O43541 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMAD6O43541 AC009237.3-201ENST00000393279 1427 ntBASIC21.87■■□□□ 1.09
SMAD6O43541 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.87■■□□□ 1.09
SMAD6O43541 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMAD6O43541 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMAD6O43541 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMAD6O43541 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms