Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF11O14788 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TNFSF11O14788 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF11O14788 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF11O14788 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TNFSF11O14788 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF11O14788 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.41■□□□□ 0.7
TNFSF11O14788 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF11O14788 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF11O14788 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF11O14788 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF11O14788 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF11O14788 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.4■□□□□ 0.7
TNFSF11O14788 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TNFSF11O14788 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF11O14788 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF11O14788 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF11O14788 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF11O14788 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF11O14788 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.4■□□□□ 0.7
TNFSF11O14788 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF11O14788 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF11O14788 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF11O14788 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF11O14788 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF11O14788 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF11O14788 BX005040.4-201ENST00000637145 1518 ntBASIC19.4■□□□□ 0.7
TNFSF11O14788 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
TNFSF11O14788 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.39■□□□□ 0.7
TNFSF11O14788 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TNFSF11O14788 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
TNFSF11O14788 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF11O14788 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF11O14788 YBX1P1-201ENST00000445822 960 ntBASIC19.39■□□□□ 0.69
TNFSF11O14788 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF11O14788 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF11O14788 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF11O14788 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF11O14788 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF11O14788 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF11O14788 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF11O14788 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TNFSF11O14788 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TNFSF11O14788 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF11O14788 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TNFSF11O14788 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TNFSF11O14788 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF11O14788 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFSF11O14788 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.38■□□□□ 0.69
TNFSF11O14788 AC026271.2-201ENST00000428091 497 ntBASIC19.38■□□□□ 0.69
TNFSF11O14788 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TNFSF11O14788 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF11O14788 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFSF11O14788 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TNFSF11O14788 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF11O14788 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF11O14788 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF11O14788 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF11O14788 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF11O14788 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF11O14788 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFSF11O14788 AC097381.1-201ENST00000429019 1296 ntBASIC19.37■□□□□ 0.69
TNFSF11O14788 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF11O14788 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.37■□□□□ 0.69
TNFSF11O14788 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TNFSF11O14788 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF11O14788 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF11O14788 AP004607.7-201ENST00000527152 1677 ntBASIC19.36■□□□□ 0.69
TNFSF11O14788 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF11O14788 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF11O14788 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFSF11O14788 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF11O14788 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF11O14788 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF11O14788 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFSF11O14788 GUSBP5-202ENST00000510805 1989 ntBASIC19.36■□□□□ 0.69
TNFSF11O14788 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF11O14788 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TNFSF11O14788 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.36■□□□□ 0.69
TNFSF11O14788 MIR6821-201ENST00000617625 74 ntBASIC19.36■□□□□ 0.69
TNFSF11O14788 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
TNFSF11O14788 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF11O14788 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF11O14788 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF11O14788 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFSF11O14788 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF11O14788 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF11O14788 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF11O14788 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
TNFSF11O14788 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF11O14788 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF11O14788 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF11O14788 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF11O14788 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFSF11O14788 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TNFSF11O14788 AC087623.3-201ENST00000607047 1098 ntBASIC19.35■□□□□ 0.69
TNFSF11O14788 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF11O14788 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TNFSF11O14788 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TNFSF11O14788 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms