Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK2O00526 AL137060.1-201ENST00000618151 2648 ntBASIC17.33■□□□□ 0.36
UPK2O00526 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPK2O00526 SRD5A1P1-201ENST00000442297 786 ntBASIC17.33■□□□□ 0.36
UPK2O00526 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.33■□□□□ 0.36
UPK2O00526 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
UPK2O00526 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.33■□□□□ 0.36
UPK2O00526 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK2O00526 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK2O00526 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK2O00526 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK2O00526 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
UPK2O00526 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.33■□□□□ 0.36
UPK2O00526 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
UPK2O00526 AC026310.3-201ENST00000625186 2373 ntBASIC17.32■□□□□ 0.36
UPK2O00526 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
UPK2O00526 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK2O00526 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK2O00526 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK2O00526 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.32■□□□□ 0.36
UPK2O00526 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.32■□□□□ 0.36
UPK2O00526 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPK2O00526 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.32■□□□□ 0.36
UPK2O00526 OR2I1P-207ENST00000453522 948 ntBASIC17.32■□□□□ 0.36
UPK2O00526 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.32■□□□□ 0.36
UPK2O00526 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK2O00526 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK2O00526 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK2O00526 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
UPK2O00526 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK2O00526 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK2O00526 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK2O00526 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK2O00526 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.31■□□□□ 0.36
UPK2O00526 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UPK2O00526 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
UPK2O00526 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 OR7E47P-201ENST00000546390 1422 ntBASIC17.31■□□□□ 0.36
UPK2O00526 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.31■□□□□ 0.36
UPK2O00526 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.31■□□□□ 0.36
UPK2O00526 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
UPK2O00526 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.31■□□□□ 0.36
UPK2O00526 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.31■□□□□ 0.36
UPK2O00526 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.31■□□□□ 0.36
UPK2O00526 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
UPK2O00526 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK2O00526 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK2O00526 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.3■□□□□ 0.36
UPK2O00526 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
UPK2O00526 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK2O00526 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK2O00526 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
UPK2O00526 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.3■□□□□ 0.36
UPK2O00526 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPK2O00526 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.3■□□□□ 0.36
UPK2O00526 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.3■□□□□ 0.36
UPK2O00526 AC087239.1-201ENST00000622671 572 ntBASIC17.3■□□□□ 0.36
UPK2O00526 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPK2O00526 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK2O00526 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.3■□□□□ 0.36
UPK2O00526 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK2O00526 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
UPK2O00526 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.3■□□□□ 0.36
UPK2O00526 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPK2O00526 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPK2O00526 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UPK2O00526 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPK2O00526 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.29■□□□□ 0.36
UPK2O00526 AL512631.2-201ENST00000604634 923 ntBASIC17.29■□□□□ 0.36
UPK2O00526 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
UPK2O00526 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.29■□□□□ 0.36
UPK2O00526 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPK2O00526 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
UPK2O00526 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.29■□□□□ 0.36
UPK2O00526 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.28■□□□□ 0.36
UPK2O00526 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.28■□□□□ 0.36
UPK2O00526 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK2O00526 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UPK2O00526 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.28■□□□□ 0.36
UPK2O00526 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.28■□□□□ 0.36
UPK2O00526 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UPK2O00526 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UPK2O00526 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.28■□□□□ 0.36
UPK2O00526 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.28■□□□□ 0.36
UPK2O00526 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK2O00526 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UPK2O00526 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms